Syngnathus scovelli (Gulf pipefish): 125994470
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Entry
125994470 CDS
T08785
Symbol
rbm19
Name
(RefSeq) probable RNA-binding protein 19
KO
K14787
multiple RNA-binding domain-containing protein 1
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sscv03009
]
125994470 (rbm19)
Ribosome biogenesis [BR:
sscv03009
]
Eukaryotic type
90S particles
Other 90S particles
125994470 (rbm19)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_11
RRM_7
RRM_ACIN1
RRM_occluded
RRM_MUD2_C
Ribosomal_60s
Motif
Other DBs
NCBI-GeneID:
125994470
NCBI-ProteinID:
XP_049619760
LinkDB
All DBs
Position
3:16907915..16913485
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AA seq
933 aa
AA seq
DB search
MSRLIVKSLPNGMKVERFREMFAAFGTVTDCRLMFTKDGKFRKFGFVGFKCEEDAITALK
HFNRSFVDTSRVTVELCKAFGDPTKAKAWSKHTRNSEPDKPTTQTETANKKEKDKKESSA
LKNLEEDEQFKEFLSVHQVRCKVPTWVNDTVEQTVDPDSAKGKGRKKPASDDYLNFDSDQ
SDDEYEEKKEDDDDEEEEDSGDNNTSKEALKSSLSDMDYLRSKVVRTVDATDESDEKVDK
QQGEEEDCGLAQLNDSVQKSRNKDDSRKKKIPVSSEDKKQGKAKKDARQEFEPTTEFTVK
LRGLPFNIKEYEIREFMTPLKPAAIRIARNEHGHQTGYAYVDLHSAQESENALKKNKDYI
RGRYIEVFRVEASGWKTTDQKAEKVQQNFTRKLKEDEEVEDVAESGRLFVRNLPYTCTEE
DIKEIFTKHGPLAEVVFPIDTLTKSPKGFAFVTYVIPENAVAALAQLDGHVFQGRMIHVI
PSIIKKEKSNFSEAGGPGSSTYKRQKDAKNKASSSSSHNWNTLFLGTSAVADTIAEKYAT
TKSKVLDHETKGSVAVRMALGETQIVQETRQFLLDSGVNLDSFSQAAAERSTTVMLVKNL
PAGVTVSELEELFSTHGSLGRVLLPPPGLTALVEFLEPTEAKRAFTRLAYTKFRHVPLYL
EWAPMGVLVAAKPAPVRAKVEEEKKEQPKEEKGEDEEEEEEEDSVPGSTLFIKNLNFSTI
EKTLQETFSKCGKVKSCTISKKKHKTGKMLSMGYGFVQYHTTEAAQKALRQLQRCNVDGH
CLELKISARATRTAEVSHKKKQVQKKQMGSKILVRNIPFEATVKEVRELFCTFGELKTVR
LPKKLAGTGSHRGFGFVDFITKQDAKKAFAALCHSTHLYGRRLVLEWADTEETVETLRRK
TAEHFHADSKKKRKAGMLGEILEDMETPRDAED
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagacttatcgttaaaagccttccaaatgggatgaaggtggagaggttccgagag
atgtttgcagcctttgggaccgtaactgactgccgcctcatgttcaccaaggatggcaag
ttccgcaagtttggctttgtcggattcaaatgcgaggaagatgcaattacagcgttgaag
cattttaataggagtttcgtggatacatccagagtgactgtggagctgtgtaaggcattt
ggtgaccccactaaagcaaaagcatggagcaaacacactcggaactctgaaccagacaaa
ccaaccacgcagactgaaactgctaataaaaaggagaaggacaaaaaggaaagcagtgca
ctgaaaaatcttgaggaggacgagcagttcaaggagttcctttcagtgcatcaggttcga
tgcaaagtaccaacatgggtgaacgatacagtggagcagacagtcgaccctgacagcgct
aagggaaaaggcaggaagaagccggcttcggatgattacctcaactttgactctgaccag
tcggacgatgaatatgaagagaaaaaagaagacgacgacgatgaggaggaggaagacagt
ggagataacaatacctctaaagaagctctgaagtccagcttgtcagatatggattatctg
cgctcaaaggtggtacgaaccgtggacgccacggatgaaagcgatgagaaggttgacaag
caacaaggggaggaagaggattgtggacttgcacaactcaacgacagtgttcaaaagagt
aggaacaaggatgactcccgcaagaagaaaatccctgtttcgtctgaggataagaagcaa
ggaaaagccaagaaagatgcaaggcaagagtttgaaccaacaacagagttcacagttaag
ctgcgaggactcccattcaatattaaagagtatgaaattcgagaattcatgacaccactg
aagcccgctgccatccgaatcgcaagaaatgaacatggccaccaaacagggtatgcatat
gtagatcttcactctgcacaagaaagtgaaaatgccttgaagaagaataaagactatata
agaggccgctacatcgaggtcttccgtgttgaagcatccggatggaagacgactgaccaa
aaggccgaaaaagttcaacaaaacttcacccggaaactgaaggaggacgaggaagtcgag
gatgttgcagaatcaggacgcctttttgtccggaacctcccttacacgtgcacagaagag
gacatcaaagaaatattcacgaaacatggtcctttagccgaggtggtcttccccattgac
actctgacaaagagtccaaaaggttttgcttttgtaacgtacgtgattcctgaaaatgct
gtggcagctttggctcagctagatgggcacgtatttcaaggtaggatgattcacgtgatt
ccatccataataaagaaggaaaaaagtaatttttcagaagccggcggtcccggctcctca
acttataaacgtcaaaaggatgcaaaaaacaaagcgtctagttccagttcacacaactgg
aatacgctctttctgggcaccagcgcagtggccgataccattgcagaaaaatacgccacc
accaaaagcaaagtcttggaccatgagacaaagggaagtgttgcagtacgaatggcttta
ggggagacccagattgttcaagagactcgccagtttcttctagatagtggtgtgaatctg
gattcctttagtcaggcagctgccgagagaagcacaacggtgatgttggtgaagaacctt
ccagccggagtgaccgtctcagagctggaggagctcttctccacccatggctctttgggg
cgagtgctgctgccgcctcccggccttaccgccctcgtggagttcctggagcccacggaa
gctaagcgagcttttacaagactggcctacaccaagtttcgtcatgtcccactgtatttg
gagtgggcgcccatgggggtgttggttgcagccaaacccgcaccagtgagagcaaaggtt
gaggaagaaaagaaggaacaaccaaaggaagaaaaaggagaggatgaagaagaagaagag
gaggaagactctgttcctggttccacacttttcatcaagaatctaaatttcagcacaatc
gagaaaacacttcaagagactttctcaaaatgtggcaaggtgaagtcatgcacaatctcc
aagaaaaaacataaaactggcaaaatgctgtcaatgggctatggttttgttcagtatcat
accactgaggcagcacagaaagccttgcgacagctccagcgctgcaatgtggatggacat
tgcttagaactgaagatttcagcgagagctacaaggactgctgaagtgtcacacaagaaa
aagcaggtgcagaagaagcaaatgggatcaaagatccttgtgcgaaatatccctttcgaa
gcgactgtcaaggaagttcgagaactcttctgtacatttggagagctgaagacagtccgc
cttcccaaaaaattagcgggtactgggagtcatagaggttttggctttgttgactttatc
accaagcaggatgccaagaaagcatttgctgccttgtgtcacagcactcatctttacgga
agacgtcttgtgctggagtgggctgatacggaggaaacggtagagacactgagacggaaa
acagctgaacattttcacgcggacagcaaaaagaaacggaaggcagggatgctgggggaa
attctggaagatatggaaactccacgtgatgcggaggactga
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