Syngnathus scovelli (Gulf pipefish): 125994494
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Entry
125994494 CDS
T08785
Symbol
arid5a
Name
(RefSeq) AT-rich interactive domain-containing protein 5A isoform X1
KO
K25857
AT-rich interactive domain-containing protein 5
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sscv03000
]
125994494 (arid5a)
Transcription factors [BR:
sscv03000
]
Eukaryotic type
Helix-turn-helix
ARID
125994494 (arid5a)
BRITE hierarchy
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GFIT
Motif
Pfam:
ARID
Motif
Other DBs
NCBI-GeneID:
125994494
NCBI-ProteinID:
XP_049619785
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Position
3:15758760..15765036
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AA seq
543 aa
AA seq
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MRAHTSGQKGLSFILKSPEDQSVRVVSKEDMETPPGETSPTVIKIHGKCKEGSQPRVQHV
EEKSFVSSLHSFMKERGSPIERIPHLGFKQIDLWMIYKAVEKLGGYNSVTARRLWKKVYD
ELGGSPTSTSAATCTRRHYERLVLPYERHLKGEDDKPLPLSKPRKPYKRNSGGKIKAEWK
GKRSKTDREGDSERLLSAGSSQSEAAAHPGSVLWSADADRRQPQVPLAPDLYAYYHLLHG
PPTTPWPANISAVGEVISPLEKKKRLAQASLRANPQGEERDRPSVIHRSASPASGSHKCD
SSDGSPRPVSSSSLSSRSPSLCSISSEDENHSAPSSDLAPDCSIRNDDTPVRHVSRDPSG
ESKDRDQVKTLEKNHIREQNIATKDLTYSSPKLKSDCVPTSSSGFIRVLTKSAQLPRPAP
IRPGNRIQHDALTHHNKSFKTIPPLSSWEMFRAMPTKFPPAQQRLSHTTCVTPSYDILRR
DSHLRTTLQQANFLPRMRIPQPHLPYRHAPVSVAHSALIYPYPCAVPLWGPHTIPQFYAP
HKL
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgagagcacacacctccggccagaagggactttcattcattttaaaatctcctgaggac
cagagtgtgagggtggtcagtaaagaagatatggagacaccgccgggcgagacgtctcct
acagtcattaagatccatggcaaatgtaaggaaggatcgcagcccagggtgcagcacgtg
gaggagaagtcatttgtatcaagtctgcactcctttatgaaagaacggggctcgcccatc
gaaagaatcccgcatctgggcttcaaacagattgacctttggatgatctacaaggcagtt
gagaaattgggcggatacaattcagtgacagcgcgacgcctgtggaagaaagtgtacgat
gaactgggaggaagtcccactagcaccagtgctgcgacctgcactcgcagacactatgag
aggctcgtgttgccctatgaaagacatttaaaaggagaagatgataagcctctcccactc
agcaaaccaaggaagccttataaaaggaattcgggaggaaaaataaaagccgagtggaag
gggaaaaggagcaagacagacagagaaggagattcggagaggctgctttcagcaggatcg
agtcagagtgaagcagcagcgcatcctggttctgttctctggtcggctgacgctgacagg
cgccagccgcaagtgcccctggcgcctgacctttatgcatattaccacctgctgcacggc
cccccaacaacaccttggcccgcaaacatctcagctgttggagaggtcatctctccactg
gagaaaaagaaacgcctggcacaagccagccttcgagcgaatccgcagggggaggaaagg
gacaggccttctgttatccaccgctcggcgtcgccagcctccggcagccacaagtgcgac
tcctctgacggctcgcctcgccccgtctcttcttcctcgctctcctccaggagcccgtcc
ctgtgctccatctcatcagaggatgaaaatcactctgcacccagttcagatttggcaccc
gactgttccatccgaaatgacgacacgcctgtgagacacgtgtcgagagatccatctgga
gagagtaaggacagagatcaagtcaaaacattagagaaaaatcatattagagagcaaaat
attgccaccaaagaccttacatattcttctcccaaattgaagtctgactgtgtcccaaca
tcttcctctggtttcatcagagttttgacaaaatctgctcagctaccgcggcctgctcct
atccggccaggcaacagaatccaacacgacgctttgacgcatcacaacaaatctttcaaa
actatcccacctttgtcttcatgggaaatgttcagagcaatgccaacaaagtttcctcct
gcccagcagaggctatcccacaccacctgcgtcacgccatcttatgacatattaagaaga
gactctcatctccggaccacgctgcagcaggcgaacttcctcccccgaatgagaatacct
caacctcacctcccgtaccgccatgcccctgtcagcgtggctcactctgctctcatctac
ccatacccgtgcgccgtccctctgtggggtcctcacaccatcccccaattttatgctcca
cacaaactatga
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