Syngnathus scovelli (Gulf pipefish): 125994544
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Entry
125994544 CDS
T08785
Symbol
rnf20
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1A
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sscv04121
]
125994544 (rnf20)
Enzymes [BR:
sscv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125994544 (rnf20)
Ubiquitin system [BR:
sscv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
125994544 (rnf20)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRE1B
CC_Bre1
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_UBOX
zf-RING_5
BRE1
zf-RING_2
zf-rbx1
A_amylase_dom_C
GP57
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
125994544
NCBI-ProteinID:
XP_049619887
LinkDB
All DBs
Position
1:complement(10734745..10744378)
Genome browser
AA seq
1020 aa
AA seq
DB search
MSGQKRPADPSGPSSNSGVHPEKRRERDGEDGGPSLSAAAASGSTAVETVIKLGGVSNSE
EQDIKALQAKNRKLGESLDQRQGIEDELRERIERLETRQATDDASLLILNRYWNQFDENI
KLFIRLYDQSPSEPEKSPTGEGRNLKPETPEPDGDSNQERSKDRGHQGETSNSFLATLAS
STSEEMEAELQERVQSSHMQATRVVEVYKCLKSTVDQLKADMDSGIAGSLCHVASKLNTL
LTGQNERLQQLSEDLKQKYNQMTSEFRSLGRAANKADQRVSELQVLSEELQWDMEKIRRR
ENRLNAHMSEILERVNSKGYKVCGEASSVCGTITINKRKFEEINSELEENQELADNRLIE
LQKLQQDLQNVLQENNNMKAELLSRAEGMVKDTSEYRCLQSQFSVLYNESLILKAQLDET
RGRLNTTRTARLRQLEHMENDEVTLQRKVRTEVFQLEDTLAQVRKEYEMLRIEFEQTLAA
NEQAGPINREMRHLISTLQTHNQQMKGEVVKFKLRLRETQAELNQIRISKGSSILQTQSS
TEIDLKEETASPMTASVSGEAVVKSEPPDNDSSTPNSAGISVKTEPGVESEVTVKEEEKE
EKKEKEEKKDKDIIKKEEKDREREKERERPTRSGIKEEREKLGSGNQAEESSGERLSSAG
GPKRKEMEQFKIVKVELKKAQESQREMKLLLDMYRSAPKEQRDKVQLMAAEKKAKSESEE
LRQRLRELEERERREGKKMADEEALRKIRSVEEQIDILNKKLSTAKQEEDALLSEMDVTG
QAFEDMQEQNIRLMQQLREKDDANFKLMSERIKSNQIHKLLKEEKEELSDQLLTLKTQVD
AQLQVVRKLEEKERLLQGTISTAERELTLRTQALDMNKRKAQESTLLSEEVRIQLEQVQQ
RLVVVREEVVENSISREKESFNSRRAQEDISKLRRKIEKAKKPAEKISNGDEILNEEISE
YKARLTCPCCNSRVKDAVLTKCFHVFCFECVKTRYDTRQRKCPKCNAAFGANDFHRIYIG
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggacagaagcgtcctgcagatcccagcggcccctcctcaaactccggtgtgcat
ccggaaaagcggagagagcgggatggagaggatggaggtcccagtctaagtgctgcagct
gcgagtgggagcacagcggtggagacggtcatcaaactgggaggggtttctaactcggaa
gaacaagatattaaagctctccaggctaagaaccggaaattgggagaatctttggatcaa
agacagggcattgaagatgaattgcgagagcgaatcgagagactagagacacgccaggcc
actgatgatgcaagcctgcttatcctcaatagatactggaatcagtttgatgaaaatatt
aagctgttcatcagactatatgaccaatcgccaagcgaaccagagaagtctccaacggga
gaaggaaggaacctgaagccagaaacccctgaaccagatggagattcgaatcaggagagg
tccaaggacagaggccaccagggcgagacatccaactccttcctggccaccctggctagc
agcaccagtgaggaaatggaagccgagcttcaggagagggtgcagtccagccatatgcag
gctactcgtgttgtggaggtctacaagtgtctgaagagcacagtagaccaactgaaagca
gacatggattctggaattgctgggagtttatgccacgtagcttccaaattgaacacgctg
ctgaccggtcaaaatgaacgtcttcaacaactgtctgaggacctcaagcagaaatacaat
caaatgaccagtgagttccgatctcttggtcgtgcagcaaacaaagcagaccagcgtgtc
agcgagctgcaggttttgagtgaagagcttcagtgggatatggagaagatccgtcgacgt
gaaaatcggctaaatgcacacatgagtgagatactagagagggtgaacagcaaaggttat
aaagtgtgtggggaggccagtagtgtatgtggaaccatcaccatcaacaagagaaagttt
gaggaaataaacagtgaactggaagaaaaccaggagctggcagataatcgtctcattgag
ctccagaagctccagcaggatctgcagaatgtgctgcaggagaataacaacatgaaggct
gagctgctgagtcgagcagagggcatggtgaaggatacctctgagtatcgctgtctgcag
tcacaattttctgtgctgtacaacgagtcactgatcctcaaggctcagttagacgagacg
cgtggccgactcaacacaactaggacggcacgccttcgacagctggagcacatggagaat
gacgaggtaactttgcaaagaaaggttcgcaccgaagtctttcagctggaagataccctc
gctcaagtcaggaaggagtacgagatgctacgtattgaatttgaacaaactctcgctgcc
aacgagcaagccggcccaatcaacagagagatgcggcatctgatcagcaccctgcaaact
cataaccagcaaatgaagggcgaggttgtgaaattcaagctgagactgagagagacacaa
gctgaactcaaccagattcgcatttcaaaggggagcagcatcttgcaaactcagtcgagc
acggagattgacttgaaggaggagacggcgtcccctatgacagcgagtgtctctggggag
gccgtggtcaagtcagaacctcctgacaatgactcttctacgccaaacagcgctggcatc
tcggtgaaaacagagccaggagttgaatctgaggtaacagtcaaggaggaggagaaggag
gagaagaaagagaaagaggaaaagaaagacaaagacatcataaagaaagaggagaaagac
cgcgagagggaaaaggaaagagagaggccaactcgcagtgggataaaggaagagagggag
aaactgggaagtggcaaccaagccgaggaatcttctggagaacgcctttcttcagctgga
gggcccaagaggaaagagatggagcagtttaagattgtcaaagtagagctaaagaaagct
caggagtcccagagggagatgaagctcctcttagacatgtatcgatctgcaccaaaggag
cagagagacaaagtccaactgatggcagcggagaagaaggccaagtcagagtcagaggaa
ctccgtcagagactgagggagctggaggagcgggaaaggagggagggtaaaaaaatggct
gatgaagaggccctaagaaagattcgctctgtcgaggagcagattgacatcctcaacaaa
aagctgtcaacagcaaaacaggaggaggatgcgttgctgagcgagatggatgtgacggga
caagccttcgaggacatgcaggaacagaacattcgcctgatgcagcagctccgggaaaag
gatgacgccaacttcaagctgatgagcgagcgcatcaagtccaaccagatccacaagcta
ctgaaagaagagaaggaggagctgtcggatcaattactcactttaaaaacacaggtggat
gcacagctgcaggtggtgaggaagcttgaagagaaggagcgcctcctgcagggcaccatc
agcactgcagagagagagttgacactcaggacacaagcgctggacatgaacaaacgcaag
gcccaagagtcaaccttgttgtcagaggaggttcgaattcaactggagcaggtccagcag
agactcgtcgtggtgcgagaggaggttgtggaaaatagcatctccagagagaaggagtct
tttaactcccggcgagcacaggaggacatctctaaactgaggagaaaaattgagaaggcc
aagaaaccggcagagaaaattagcaatggagatgaaatcttaaatgaagaaattagtgag
tataaggctcggctcacatgtccctgttgcaattcgcgagtgaaagacgccgtcctgaca
aagtgcttccacgtcttctgcttcgagtgcgtcaagacacggtacgacacacgccagagg
aaatgccccaagtgcaacgctgccttcggagccaacgacttccatcgcatttacattggc
tag
DBGET
integrated database retrieval system
