Syngnathus scovelli (Gulf pipefish): 125994565
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Entry
125994565 CDS
T08785
Symbol
grid2
Name
(RefSeq) glutamate receptor ionotropic, delta-2 isoform X1
KO
K05207
glutamate receptor delta-2 subunit
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
125994565 (grid2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sscv04040
]
125994565 (grid2)
Ion channels [BR:
sscv04040
]
Ligand-gated channels
Glutamate (ionotropic)
125994565 (grid2)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
DUF6724
Motif
Other DBs
NCBI-GeneID:
125994565
NCBI-ProteinID:
XP_049619881
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All DBs
Position
3:18088546..18348582
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AA seq
1023 aa
AA seq
DB search
MYLTGSQLRVDPASWRKPAGIGSSSPATPLRMDEGAIFDETARKDDEVFRLAVADLNLNN
EILQTEKITISVEFVDGSNPFQAVQEACELMNRGILALVSSIGCMSASSLQTLADAMHIP
HLFIQHSKAGTPRSACPLTSRSPGADDYTLTVRPPVYLNEVIMQVVSEYGWQKFVLFYDS
DFDIRGIEDFLDRASHHGMDVSLQKVESNVNMMITSLFRTMRVEELHRYRDTLRRAVLFM
SPATAKAFISEVVETNLVAFDCHWILINEDISDYDLQELVRKSVGRLTLVRQTFPMPQNT
TQRCVKHNHRINTSLCDPKNAKAQQLEITNRYIYDTVLLLANTFHRKLEDRKWHSMASLS
CIRKNSKPWQGGKSMLDTVKKFGVSGLTSFLEFTDNGTNPNIIFEILGTNYGEDRGRGVN
RLATWDPLHGLNGTLTDRKLENNMRGVVLRVVTVLEEPFVMVSENVLGKPKKYQGFSIDV
LEALSNYLGFKYEIYVAPDHKYGSLQPDGQWNGLMGELVSKQADVGLSALTITPERESAV
DFTTRYMDYSVGVLLLKAERTVDMFACLAPFDLSLWACIAGTVLLIGILVYLLNWLNPPR
LPMGSVSSTTLYNSMWFVYGSFVQQGGEVPYTTLATRMMMGFWWMFALIVISSYTANLAA
FLTITRIENSIQSLQDLSKQTELPYGTVLDSAVYEQVRSKAMNPFERDPMYSQMWRMINR
TGGADTNVEESKEGIRKVKYGRFGFVWDAAVLEYVANNDEDCSFYTVGSNAPDRGYGIAM
QHGSPYRDIFSQRILELQQNGDMDILKLKWWPKDGPCELYSSVQSRQNNALDIHSFAGVF
CVLAAGVVLSCLIAMVESWWSRRKGSRVPSKEDDKEIDLEHLHRRVNSLCTEDESPHKQF
STSSVDLTPLEMDALPAARQALEQISDFRNTHITTTTFIPEQIQTLSRSLSTKAAAGFSA
GFGGASSVLQDHRTGGVGPFRQRAPNGGFFRSPIKTMSSIPYQPTGPGPNFGYGNDPDRG
TSI
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atgtatttgactggcagccagttgagggttgatcccgcttcttggcggaagccagctggc
ataggctccagctcacctgcgactccgttgaggatggatgaaggcgccatcttcgacgaa
actgcacggaaggacgatgaagtgttccgcctcgccgtggctgacctcaacctgaacaat
gagatcctgcagacagagaagataacaatctctgtggaattcgtggatgggagcaaccca
ttccaggctgtgcaagaagcatgcgagctgatgaaccgtggaatcctggccctggtcagc
tccatcggctgcatgtcggcgagtagcctgcagacgctagccgacgccatgcacatcccg
cacctcttcattcagcactccaaagctggcacgccccgctccgcctgcccgctcaccagt
cggagccctggagccgatgactataccctaacggtgcggccgcccgtttatctcaatgag
gtcatcatgcaagtggtgtccgaatacggctggcagaagtttgtcctcttctacgattcc
gactttgatatccgtggtattgaggacttcctggaccgtgcctctcaccatggcatggac
gtgtctctccagaaggtggagtccaatgttaacatgatgatcacaagcctgttcaggacc
atgcgggtggaggagctacaccgctacagggacacgctccgcagagccgtactcttcatg
agcccagctaccgctaaggcctttatctctgaggtggtagagaccaacttggtggccttt
gactgtcactggatcctcatcaacgaggacatctccgactatgacctgcaagaattggta
aggaagtcggtgggtcgactaacgttggtgcgccagaccttccccatgccgcagaacaca
acccaacgttgcgtcaagcacaaccaccggatcaacacgtccctttgtgacccaaagaac
gccaaagctcagcagctggagatcaccaaccgctacatctatgacacagtgctgctgctg
gctaacacctttcacagaaagctggaagacaggaagtggcacagtatggccagtctgagc
tgcatccggaaaaattccaaaccctggcaaggcgggaaaagcatgctggacactgtcaaa
aagttcggcgtgagtggcctcaccagcttcctggaattcaccgacaacggcaccaaccct
aacatcatctttgaaatcctgggcacaaactacggagaagaccgtgggcgaggagtcaac
aggctggccacgtgggatcctcttcatggtctgaatggcacgctgaccgacaggaaattg
gagaacaatatgcggggagtggtgctgagagtcgtcactgtcttggaggagccatttgtg
atggtgtcggaaaacgttctcggcaaacccaagaaataccagggattctccatcgatgtc
cttgaagctctctccaactatttgggtttcaagtacgagatttacgtcgcaccagaccac
aaatacggcagcttgcagcccgacggccagtggaatggactcatgggtgaacttgtttct
aagcaagccgacgtcggactctccgccctgactatcacgccagagcgcgagagcgctgtg
gacttcaccacgcgctacatggattactcggtgggcgtgctgctactcaaagctgagcgc
acggtggacatgttcgcctgcctggcgcccttcgacttgtcgctgtgggcgtgcatcgcg
ggcactgtgctgctgataggcattctggtctacttgctcaactggctcaacccacctcga
ctgcccatgggctccgtgtcctccacaacgctctataactccatgtggttcgtgtacggc
tcctttgtacagcaaggtggagaggtcccctacaccaccctggccacaaggatgatgatg
ggcttttggtggatgttcgctctcattgtcatttcctcttatacggccaatttagcggcg
ttcctcaccatcacgcgcatcgagaactccatacagtcactccaggacttgtccaagcag
acggagcttccctacggcacagtgctggattctgctgtgtacgagcaggtgcgctccaag
gcgatgaacccctttgagagagaccccatgtactcgcaaatgtggcggatgatcaaccgc
acaggaggagccgacaccaacgtggaggagtccaaggagggcattcgaaaggtgaagtac
ggccgctttggctttgtgtgggatgcggcggtgctggagtacgtcgccaacaacgacgag
gactgctccttctacacggtgggcagcaatgcgccggatcgcggctacggcattgccatg
cagcacggcagtccctacagagacattttctcccagagaatcttggaacttcaacagaac
ggcgacatggatatactcaaactcaagtggtggccaaaagacggcccctgtgaactctac
agctcggtgcaatcacggcaaaacaacgccctggacatccatagcttcgccggcgtcttc
tgcgtcctcgcggccggcgtggtgctctcctgtctcatagccatggtggaaagctggtgg
tctcggcggaagggatccagagtcccctccaaggaggacgataaggagatcgacctggag
cacctacaccgccgggttaacagcctgtgcacagaagatgaaagcccccacaagcaattc
tccacctcttccgtcgatctgacgcccctcgaaatggacgctctgcccgccgcccgccaa
gccctggagcagataagcgatttccgaaacacgcacatcaccaccaccaccttcatcccc
gagcagatccagaccctcagccgcagcctgtccaccaaagcagccgctgggttttccgcc
ggcttcggcggcgccagcagcgtcctccaggaccaccggactggtggggtggggcctttt
aggcagagggcccccaacggtggcttcttccgcagccccattaaaacaatgtcctccatc
ccctaccagcccacaggtccaggacctaactttggatatggcaacgacccagacagaggt
acatccatctaa
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