Syngnathus scovelli (Gulf pipefish): 125994634
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Entry
125994634 CDS
T08785
Symbol
trim36
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM36 isoform X1
KO
K12013
tripartite motif-containing protein 36 [EC:
2.3.2.27
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sscv04131
]
125994634 (trim36)
04121 Ubiquitin system [BR:
sscv04121
]
125994634 (trim36)
Enzymes [BR:
sscv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125994634 (trim36)
Membrane trafficking [BR:
sscv04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
125994634 (trim36)
Ubiquitin system [BR:
sscv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
125994634 (trim36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COS
zf-B_box
zf-RING_UBOX
ANCHR-like_BBOX
zf-C3HC4
SPRY
zf-C3HC4_4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_5
RING_XB3-XBAT31
zf-RING_2
fn3
Pur_ac_phosph_N
Nnf1
TCAD9
Cdh1_DBD_1
Motif
Other DBs
NCBI-GeneID:
125994634
NCBI-ProteinID:
XP_049619969
LinkDB
All DBs
Position
3:17990731..18011391
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AA seq
793 aa
AA seq
DB search
MSDSEDMTEFASIVERIERGEVPIKNIERELICPICKELFTHPLILPCQHSICHKCVREL
LMLNYDDSLDGGSECSMPGSPRSRVPSPSMERLDKLVRSASVRRSLGSRGRRGLRLLSYC
SSPRKRSGNTEINPALLTSPQKRSISSPGWRRGSVTPRVTTIACPGCQHDIDLGERGISM
LFRNFTLESIVERYRQAARAAIAIMCNICKPPQQQEATKSCMDCKASYCNECFKMHHPWG
TPRAQHEYVGPTTNFRPKVLMCPEHEMEKVNMYCEACRRPVCHLCKLGGSHANHRVTSMS
NAYKILKEKLAKSIHYLISKEDQVRSQITGLEQLISQTEENGQLAERQANEHFERLFETL
QERKSEMLKSIEQSRSRRMGQLKSQMEEYQGMLENSGLVGYAQEVLKETDQSCFVQTAKQ
LHVRIQKATESLRTFHPSADSCFDEFVLDTSREETLLKELCFGGVPDPPMIDLSKSRVYN
EATIFWRLSDDHQPTDQHVLEYRKLGDPRQSLSQEDIENGAWQAMEHLHGPSTTVCGLDP
DSLYAFRVRTCRNSVFSPYSPEVTFHTPPAPAFDFLFNDKCGFCMERLVLNKRRDAVESV
AGVAFLLAADRVQTGSYVSLDYIIGDTGISQGRHYWAFKVEPQSYLVKVGVASDTKLLEW
FHNPRDTSSPRYDHDSGHDSGSEDACYELSQPFTLLTVGMGKLFIPKASSSSSSATAATS
SGDPGNRTLPMPQRLGVCLDYDASRVYFYDADSMRCLYERQVDCSGVMYPAFGLMGGGKV
QLEEFVTAKRLTF
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgtcggactcagaggacatgacggagttcgccagcatcgtggagcgcatcgagcgcggc
gaggttcccatcaagaatattgaacgtgagctgatctgccccatctgcaaggagctcttc
acacacccgctcatccttccatgccagcacagcatttgtcacaaatgcgtacgggagctg
ctcatgctcaactatgacgactccttggacggtggctccgagtgctcaatgccgggcagc
cccaggtcccgcgtgccatcgccctccatggagaggctggacaagctcgtacgatcagcc
tcagtgcgaaggtcgctcggaagtcgaggtagacgcggcctccggctcttgagttactgt
agtagtcctcggaaacgaagcggaaatactgagataaatccagcactcctcacttctccc
caaaaacgttccatctcatccccgggctggcgccgagggtccgtgacacctcgggtcacc
accatcgcctgcccgggctgccagcatgacatcgacctaggcgagcgcggtatcagcatg
ctgttccgcaacttcactctggagagcatcgtggagcgctaccggcaggcggcccgcgcc
gccatcgccatcatgtgcaacatctgcaagccgccgcagcagcaagaggccaccaagagc
tgcatggactgcaaggccagctactgtaacgagtgcttcaagatgcaccacccctggggc
acgcccagggcccagcacgagtacgtgggacccaccaccaactttagacccaaggtgctg
atgtgtcccgagcacgagatggagaaggtgaacatgtactgcgaggcgtgccgacggccc
gtgtgccacctgtgcaagctcggaggcagccacgccaaccacagggtcacatccatgagc
aacgcctacaagatcctcaaggagaagctggccaagagtatccattacctcatcagcaaa
gaggaccaagtcaggtctcaaattaccggactggagcagctcatcagtcagacagaggaa
aatggacagctagcagagcgtcaggccaacgagcactttgaacgcctgtttgagaccctg
caggagagaaaatcggaaatgctcaaatccattgagcagtcacgaagcaggcgcatggga
cagctcaaatcccagatggaggagtaccagggcatgctggagaacagtggcctggtgggc
tatgctcaggaagtcctcaaagagaccgaccagtcttgctttgtgcagactgccaagcag
ctgcatgtcagaatccagaaagccacagagtcactaaggactttccacccatcagctgac
tcctgttttgatgagtttgtgctggacacgtcaagagaagagaccctcctcaaagagttg
tgtttcggcggagttccggacccccccatgattgacctgtccaagagccgagtctataat
gaggccaccatcttctggaggctgtctgacgaccaccaacccacagaccagcacgtgcta
gagtaccgcaaattgggtgacccgaggcagtcgctgtcccaagaggatattgagaatggc
gcctggcaagcgatggagcacctgcacggtcccagcaccacagtatgcggcctggacccc
gacagtttgtacgcattcagggtgcgcacctgccggaactctgtgttcagcccttatagc
cctgaggtcaccttccatacaccccctgcacctgccttcgacttcctgttcaatgacaag
tgtggcttctgcatggagcgcctggtgctcaacaagcggcgggatgcagtggagagcgtg
gccggcgtggccttcctgctggctgccgaccgcgtacagacgggcagctacgtcagcctg
gactacattattggcgacacgggcatctctcagggaagacactactgggccttcaaagta
gagccacagtcctacttggtcaaagtgggcgtggcctcggacacaaagctgctggaatgg
tttcacaacccgagggacactagcagcccgaggtacgaccacgacagcggacacgacagc
ggcagtgaggacgcttgctatgagctctcgcagcccttcaccctcctcactgtgggcatg
ggcaagctctttatccccaaggcgtcgtcctcgtcttcatctgccactgccgccacctcc
tcgggcgacccgggcaaccgcacgctgcccatgccgcagcgcctgggcgtgtgcctggat
tacgacgccagccgcgtgtacttctacgacgccgacagcatgcgctgcctctacgagagg
caagtggactgctcaggggtcatgtacccggcgttcggcctcatgggcggcggcaaggtc
cagctggaggagtttgtcaccgccaagaggctcaccttctga
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