Syngnathus scovelli (Gulf pipefish): 125994638
Help
Entry
125994638 CDS
T08785
Symbol
fem1c
Name
(RefSeq) protein fem-1 homolog C
KO
K25805
protein fem-1 homolog A/C
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sscv04121
]
125994638 (fem1c)
Ubiquitin system [BR:
sscv04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
125994638 (fem1c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Ank_KRIT1
ANK_LRRK2
TPR_12
TPR_NPHP3
TPR_10
TPR_2
Motif
Other DBs
NCBI-GeneID:
125994638
NCBI-ProteinID:
XP_049619977
LinkDB
All DBs
Position
3:17963068..17969111
Genome browser
AA seq
618 aa
AA seq
DB search
MDLKTAVFNAARDGKLRLLEKILENKDVREVSKLMGEKTNGATPLLMASRYGHLDLVEYL
LECCRAPVEVGGSVNFDGETIEGAPPLWAASAAGHLKVVQSLLGHGASVNSTTLTNSTPL
RAACFDGHLDIVKYLVEHKADLEVANRHGHTCLMISCYKGHKEIAQYLLERGADVNRKSV
KGNTALHDCAESGSLEIMRMLLQYRASMEQDGYGMTPLLSASVTGHTNIVDYLTAHKQTS
HKERINALELLGATFVDKKRDLLGALKYWKKAMDLRYIDSNCVVHKPEPKQRIMAYDYAR
EVTNAEELDGLISDPDEMRMQALLIRERILGPQHPDTSYYIRYRGAVYADSGNFERCINL
WKYALDMQQSNLDPLSPMTASSLLSFAELFSFMLQDRAKGLLGTSVSFKDLMGILSKSVL
EIERAVRQRRSQPLDPAQLSKALSIILHLICLLEKVPCTTEQDHFKKETIYRFLKLQPRG
KNGFSPLHLAADRNTTCVGRYPVCKFPSLTVTAILLECGADVDSRDDNHNSPLHIAASNG
HADIMNLLVSGGAHFDSTNAFQQTACELLDEKELARNIVQPINHTTLQCLAARVIVKHSL
HYQGNIPEKLEAFVLLHR
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggatttaaagacggcggtgttcaacgcggccagagacgggaagctccgcttactcgaa
aagatcctggagaacaaagatgtacgcgaagtgagcaagttaatgggcgagaagacaaac
ggcgccacgccgctcctcatggcctcccgctacggtcacctggacctggtggagtacctg
ctcgaatgttgccgggcgcccgttgaggtcggtggctcggtcaacttcgacggggagacc
atcgagggtgcaccgccgctctgggccgcatcagccgccggccacctgaaggtggtgcag
tcgctgctcggccacggtgcctccgtcaacagtacgacgctgaccaattcgaccccgctg
cgggcggcttgcttcgacggccacttggacatcgtcaagtacttggtggagcacaaggcc
gatctggaggtggccaacaggcacgggcacacatgccttatgatatcctgctacaaggga
cacaaggagatagcgcagtatctgctggaaagaggcgccgacgtcaataggaagagtgtt
aaaggtaacactgcgcttcacgactgcgccgagtcgggcagtctggagattatgcggatg
ttgctgcaataccgggcgtccatggagcaggatggctacggcatgacgccgctgctgtcc
gccagcgtcacgggccacaccaacattgttgactacctaaccgcgcacaagcagacaagc
cacaaggagcgcatcaacgcactggagctcctgggggccacctttgtggataaaaagaga
gacctgctgggagctttgaaatactggaaaaaagccatggatttaagatacatagacagc
aactgcgtggtccataaacctgaacccaagcagcggatcatggcttacgactatgcccgt
gaggtgacaaacgcggaggaactggacgggctcatatctgacccggacgagatgcgcatg
caggccttgctcatccgcgagcgaattctgggcccgcaacacccggacacgtcctactac
atccggtaccgcggtgccgtctacgccgactcgggcaactttgagcgctgtatcaacttg
tggaagtacgccttggacatgcagcagagcaatctggaccccctgagccccatgacagcg
tccagcctgctgtcgttcgccgagctcttctccttcatgctgcaggatcgggctaaggga
ctcttgggcacgtctgtctctttcaaagacctgatgggcatcctgtccaaaagcgtgctg
gagatcgaacgcgccgtccgccagaggcgctcgcagccgctggatcccgcccagctcagc
aaggcgctgtctatcatcctgcatctcatctgtctgttggagaaagtgccgtgcaccacg
gagcaggaccactttaagaaggagaccatctataggtttttgaagctgcagccacgtggc
aagaacggcttcagcccgctccacctggccgccgaccgcaacaccacctgcgtgggccgc
tacccggtctgcaaattcccctcgctcacagtcaccgccatcctgctcgagtgcggcgcc
gacgtagatagtcgagatgacaaccacaacagcccactccacatcgccgcatccaacggc
cacgccgacatcatgaacctgctggtgtcaggcggcgctcactttgacagcaccaacgcc
ttccagcagacggcctgtgagctcctggacgaaaaggagctggcgcgcaatatcgtccag
cccatcaaccacaccacgcttcagtgcctggctgcccgcgtcatcgtcaagcacagcctc
cactaccaggggaacatcccggaaaaactggaggccttcgtgctgctccacagataa
DBGET
integrated database retrieval system
