Syngnathus scovelli (Gulf pipefish): 125994645
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Entry
125994645 CDS
T08785
Symbol
gapvd1
Name
(RefSeq) GTPase-activating protein and VPS9 domain-containing protein 1 isoform X1
KO
K27566
GTPase-activating protein and VPS9 domain-containing protein 1
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sscv04131
]
125994645 (gapvd1)
Membrane trafficking [BR:
sscv04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
125994645 (gapvd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGAP
VPS9
DUF5601
Motif
Other DBs
NCBI-GeneID:
125994645
NCBI-ProteinID:
XP_049619989
LinkDB
All DBs
Position
3:complement(14698584..14720156)
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AA seq
1484 aa
AA seq
DB search
MVKPDIHTLAHHLKQERLYVASEKQLIQRLNSDVLKTAERLYRAAWIAKQQRINLDRLIL
TSVEASPAECCQHAKMLEDTQFVDGYKTLSFHETIYGEFLARLRENPRLVASCLVAGERL
NQEHTQGVIQTVFTSLYGNCIMQEDESYLLQVLRYLVEFELKESDNPQRLLRRGTCAFSI
LFKLFSEGLYSAKLFLTATLHEPIMQLLVEDEDHLETDPCKVTERLTRVQQERFGEKGSE
GYKQRVQAAVETNEAKLVALVNKFIGYLKQNTYCFPHSLRWIVSQMYKTLSCVEGLEVGE
VRTMCTDLLLTCFICPAIVNPEQYGIISDAPINEVARFNLMQVGQLLQQLAMADDDTDPR
RKSCLSKFDKSCVAAFLDVVIGGRAVETPPMSSMNLLEGLSRTAVYVTHQQLIALVDFVR
RVMTGDHLREEEHMALETLLANVPQSQTGKNNSLELTPSNTPQLSPASTPANKKNRLPIG
QHLAAIASWDPTTTSLSAHIPLVTPFAARSRSRTNLAQEGEAETSSQESLQELMPEEVLV
ISFGNGPQTVPGMMSENEVLNLQMADAAQGDSHADDTKLHGKPDKTLRFSLCSDNLEGIS
EGPSNRSNSVSSLDLEGESVSELGAGPSGSNGVEALQLLEHEQATTQDNLDDKLRKFEIR
DMMGLTEDRDISETVSETWSTDVLGSDFDPNMDEDRLQEIAGAAAENMLGSLLCLPGSGS
VLLDPYGSTISETTSEAWSVEVLPSDSEAPDSKQEERLQELESCSGVGSTSDDTEVREVS
SRPSTPGLSVVSGISATSEDIPNKIEDLRSECSSDFGGKDSITSPDGEESGHGAQHLTSP
ASQTDSLLVMFDPLSCAEGSTTGTIVRPKVHYARPAHPPPDPPIPEASVVGQETRHSFVM
PHSLAQAEFDNKQRHSFPDRLVRSRSSDIVCPGRRPTSDPGLNRRVAVEERDSVGAFAAG
PSMSPSKDSLKGEAEDRKDSDDEKSDRNRPWWKKRFVSAIPKVLYWTAESDVPAPIAAFR
KRDKHEKDDIAPERIPQEEPLPRQSTQVQAAEDILDKYRNIKRTSPSDGATAGAAYEGAG
DLCAEESVHDSPREDPMQNISTDDLPDSASQTAQQHGSKFSFSDAKKKLRMALCSADSVA
LPILTSATTRNGLPDHMDPEDNEIVCFLKVQLAEAINLQDKNQMAQIQETSRCVTRFDPR
TCRKLLAAIAEDYRKRAPYIAYLTRCRQGLQTSQAHLERLLQRVLRDKEVANRYFTTVCV
RLLLEHMESRMLDFIKAFQVCTAADDKTAAVEDFLRYLYGAMARDAIWQYASEDQLQDAQ
MAIERSVMNRIFKLAFYPNQDGDILRDQLFHEHIQRLSKVVTANHKALQIPEVYLKEAPW
PSAQSEIKTINAYKTPRDKVQCILRMCSTIMNLLSLANEDSVPGADDFVPVLVFVLIRAN
PPCLLSTVQYINNFYASRLSGEECYWWMQFTAAVEFIKTIDDRK
NT seq
4455 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagccagacattcatactctggcccaccacttgaagcaggagcggctttatgtg
gcatcagagaagcagctaatccagagactcaatagtgatgtcctaaagacagccgagagg
ctataccgggccgcctggattgccaagcaacagcggatcaatctcgatcggctcattctc
accagtgtggaagcctcaccagctgaatgctgccaacatgccaaaatgctggaggacacg
cagtttgttgatggctacaagactctcagcttccacgagaccatctatggtgaattcctg
gcccggttgagggagaaccccagactggtggcatcatgcctagtggcaggggaaaggctg
aaccaggagcacacccaaggggtcatccaaaccgtcttcacttcactttatgggaactgt
atcatgcaggaagatgagagctacttgctacaggtgttgcgatacctggtagagtttgag
ctaaaggagagtgacaacccacagcggctactgcgacgaggcacatgtgccttcagcatc
ctgttcaagctcttctccgagggcctgtactcagccaagctcttcctaacagccaccctc
cacgaacctattatgcaattgttggtggaagatgaggaccacctggagacagacccatgc
aaagtgactgagcgcctgactcgagtccagcaggagcgctttggcgagaagggctctgag
ggctacaaacaaagagttcaagcagctgttgagaccaatgaagcaaagttagttgctctg
gtcaacaagtttattgggtatttgaagcagaacacctattgcttcccccatagcctgcga
tggattgtgtcgcagatgtacaagacgttgtcatgcgtggaaggtctagaagtgggagag
gtgcgtaccatgtgtactgacctactgctgacctgcttcatttgtccggcaattgttaat
ccggaacagtatggtatcatctcagatgcccccattaatgaagtggctcgcttcaattta
atgcaagtcggccagcttttgcagcagctcgcgatggcggatgacgatacagaccctaga
cgaaaaagttgtttgtccaaatttgataaaagttgtgttgctgcttttctggatgttgtg
attggtggaagagcagttgaaacaccaccgatgtcgtcaatgaaccttctcgaaggcctg
agcaggactgcggtttatgttacacatcaacagctgatagcattggtggattttgtgcgt
agggtaatgactggagaccaccttagggaggaggagcacatggccctggaaaccctgttg
gccaatgtgccccaatcgcaaactgggaagaacaacagtctggaacttaccccttccaac
acccctcagctctcccctgcgagcactcctgctaataagaagaacagactccccatagga
caacatttagctgctatagcatcttgggaccctacaaccacctctctctctgctcatatt
ccattagtaaccccttttgctgctcgaagccgtagccgtaccaacttagcccaggagggg
gaagcagagactagctcccaggagtcgttgcaggagctaatgccagaagaggtgcttgta
atatcatttggaaatggtcctcagactgtccctggaatgatgtcagagaatgaggttttg
aacttgcagatggctgatgctgcccaaggcgacagccatgcagacgacacaaagctgcat
ggcaaaccagacaaaacgctgcgcttttcactctgcagtgacaacttggaaggcatctct
gagggtccatctaatcgttctaattcagtgtcatctcttgacctcgagggagagtctgtt
tctgaactgggtgctggaccctcaggaagtaatggggtggaggctctccagcttttggag
catgaacaagccaccactcaagacaacttggatgataagctgcgcaagtttgaaatcaga
gacatgatgggcctaacagaggatcgggacatttctgagactgttagtgagacctggagc
actgatgtgctcggcagtgactttgaccccaacatggatgaagatcggctgcaggaaata
gcaggggcagctgcagagaacatgctcggcagcctgctgtgcctcccaggatcaggctca
gtgctgctggacccctacggctctacaatctcagagaccacaagcgaggcatggagtgtg
gaggtcctgccaagtgattcagaagccccagattccaaacaggaggaacggctgcaggag
ctcgagagctgctcaggggttggtagcacctcagatgatacagaagtccgggaggtcagt
tcgagaccaagcactcctggcctgagtgtcgtctcaggtatcagtgcaacctctgaggac
attcccaacaagatagaggatttgcgctcagagtgcagctcagacttcggaggaaaggac
tctataaccagtccagatggggaagagtcaggccacggagcgcagcatctgacttcgcca
gcctcacaaactgattctctattggtcatgttcgatccgctctcttgtgcagaaggttcc
accactgggacaatagtgaggcccaaggtgcactatgccaggcctgctcacccaccccct
gatccccccatccccgaagccagcgtcgtcgggcaggagacacgccactctttcgtcatg
ccccacagcttggctcaggctgagtttgacaacaagcagcgccactccttccctgaccga
ctggttcggagtcgcagctctgacattgtttgcccgggccgtcgacctacgagtgaccct
ggcctgaatcgtcgtgtggcagttgaagagcgtgactcggtgggggcctttgctgcaggg
ccatccatgtcgcccagcaaggactctttgaaaggagaggctgaggacagaaaagacagt
gatgatgagaagtctgatcgtaacaggccatggtggaaaaagcgttttgtgtcagccatc
ccgaaagtgctgtattggacggctgagagtgacgtcccagctcctatagctgcatttcgg
aaacgagacaagcacgagaaagatgatattgctccggagcgaatcccgcaagaagaacct
ttgcccagacaaagcacccaagtccaagcagcggaagacatcctggacaagtaccgaaac
ataaagaggaccagcccaagtgatggagccacagcaggagcggcttatgagggtgctgga
gatctttgtgctgaagaaagtgttcatgactctccaagagaagatcctatgcagaacatt
tctactgatgacctcccagattcagccagtcagacagctcagcagcatggttcaaagttt
tcttttagtgatgccaagaaaaagttgcggatggcattgtgttctgcagactcagtggct
ctgcctattctgacctcggctaccactagaaatggtttgcctgaccacatggaccctgaa
gacaatgagatcgtgtgcttcctaaaggtccagttagcagaggccatcaacctccaggat
aaaaaccagatggcccagattcaggagacttcgcgttgcgtcacccgtttcgacccccgt
acctgtcggaagctgcttgctgccattgcagaggattacagaaagcgagctccatacata
gcctatttaacgagatgccggcagggcctgcagacctcacaggcccatctggagaggctc
ctccagagagttctgagagacaaggaggtagccaaccgctattttaccactgtatgtgtt
cgtctccttctggagcacatggagtccaggatgcttgacttcatcaaggcattccaagtg
tgcacagcagcagatgacaagactgcagcggtggaggattttctgcgctacttgtacggc
gccatggcccgtgatgccatttggcagtatgcgagtgaggaccagctgcaggatgcccag
atggccatcgagcgcagcgttatgaaccgcatcttcaagctggccttttaccccaaccag
gatggagacattctcagagatcagcttttccatgaacatattcaacggctgtctaaagtt
gttactgctaatcataaagcgcttcaaattccagaggtttacttgaaggaggctccctgg
ccctctgcgcagtctgagatcaagaccatcaatgcctataagacacccagagacaaagtc
cagtgtatactgcgcatgtgttccactatcatgaacctcctcagtctggctaacgaagac
tctgtccccggagctgatgactttgttcctgtgcttgtctttgtcctcatcagggcaaac
ccgccttgcctgctgtccaccgttcagtacatcaataatttctacgccagccggctgagt
ggggaggagtgctattggtggatgcagttcactgcggcggtggaattcattaagaccatc
gacgatcgcaagtga
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integrated database retrieval system
