Syngnathus scovelli (Gulf pipefish): 125994653
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Entry
125994653 CDS
T08785
Symbol
dtx1
Name
(RefSeq) E3 ubiquitin-protein ligase DTX1 isoform X1
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
125994653 (dtx1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sscv04121
]
125994653 (dtx1)
Enzymes [BR:
sscv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125994653 (dtx1)
Ubiquitin system [BR:
sscv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125994653 (dtx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
WWE
WWE_5
zf-C3HC4
zf-RING_UBOX
zf-rbx1
zf-RING_2
zf-ANAPC11
zf-UDP
zf-RING_Vps41
zf-RING_5
zf_RING_Vps8
PHD_NSD
Motif
Other DBs
NCBI-GeneID:
125994653
NCBI-ProteinID:
XP_049620003
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All DBs
Position
3:14757490..14783561
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AA seq
631 aa
AA seq
DB search
MARPGPGLLLPANVLGYPPQNLARVVVWEWMNEHGRWRPYSAAVCHHIENILKGDARGTV
VLGQVDGQLSPYIIDLQSMHQFRQDTGTMRPVQRNFYEPSSAPGKGVVWEWENDNGSWTL
YDMEICVTIQNAYEKQHPWLDLTSLGFCYLIDFNSMSQTNKQSQRKRRLRRRMDLAYPLI
MGSIPKSQSWPVGASSGQPCSCQQCILVNSTRAASNAILASQRRKLHGGAAGNTGATGTL
TTVRQSNTFAGTSLWSPTSSVTNNVSIGGGQTKGEQVQVPLSPTNFPVMSSLGHNTLGVN
GQNNLNRPGTQRISVATPRGAIPPGVPALPVKNLTGSGPVHPAIAGMTGILMCAVGLPVC
LTRAPKPILHPPHISKSDMKPVPGVNGTRRKTKKKHLRKGKTPEDVVRRYTDKIKVAPDE
DCTICMERLATASGYEGVLQHKGIKPELVGKLGKCGHMYHLLCLVAMYNNGNKDGSLQCP
TCKTIYGEKTGTQPPGKMEYHVIPHCLPGYPDSKTIRIVYDIPAGVQTNEHPNPGKKFSA
RGFPRQCYLPDNEKGRKVLKLLITAWDRRLIFTIGTSSTTGESDTVVWNEIHHKTEFGSN
LTGHGYPDPNYLDNVLTELSAQGVGEDNLKD
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atggctcgccctgggccaggcttgctgcttcccgcaaatgtactgggttaccctccccag
aatctggccagagtggtggtctgggagtggatgaatgaacatgggcgctggaggccctac
agtgcagcggtgtgccaccatattgagaacatcctgaagggcgatgcccgaggaactgta
gttttaggacaggtagatggccagctatctccttacatcatcgatttgcagtcgatgcat
cagtttcgacaggacacaggcaccatgagaccagtgcagaggaacttctatgaaccgtcc
tctgctcctggcaaaggtgtagtatgggagtgggagaatgacaatggctcatggacgctg
tatgatatggagatctgcgtgaccatccagaatgcctacgagaagcagcacccgtggctc
gatctgacttctctaggcttctgttacctcattgactttaatagcatgtcacaaaccaac
aagcagagtcaacgcaagcggcggcttcggagacgtatggatcttgcttacccgcttatc
atgggttccatccccaagtcgcagtcttggcctgtgggcgccagctccggccagccctgc
tcatgccagcaatgcatcctggtcaacagtacgagagccgcatcgaatgcaatccttgcc
tctcagcgacggaagctccacggaggggctgcaggcaatacaggtgccacaggaaccctg
acgacagtgcggcagagcaacacctttgctggaacctctctttggtctccaacctcatca
gtgaccaataatgtcagtataggaggcggccaaaccaaaggtgaacaggtgcaggtgcca
ttgtccccaaccaactttcctgtgatgtcatcccttggccacaacacacttggagtcaat
ggacagaacaacttgaaccgaccaggcactcagcgcatctctgtggccactcctagagga
gccattccaccaggtgttcctgctctcccagtcaaaaacctgactgggtctggaccagtg
catccagcgatagcaggtatgaccggtatcctgatgtgcgctgtaggtctccctgtttgc
ctgacccgagcacccaagcccattctgcacccgccgcacatcagtaagagcgatatgaag
cctgtgccgggagtcaacggtacgcgacgcaagaccaagaaaaagcacctgagaaaaggg
aaaaccccagaggatgttgtccgtagatacactgacaaaattaaagtggcaccagatgag
gactgtaccatctgcatggagaggctggccacggcgtcaggctatgaaggcgtcctgcag
cacaaaggcatcaagccagagttggtgggcaaacttggcaaatgcggccatatgtaccat
ctgctgtgcctggtggccatgtacaacaatggcaataaggatggcagtcttcaatgccca
acatgcaagaccatctatggagagaaaacgggcactcagcctcctgggaagatggaatac
cacgtcatcccccactgcctacccggctacccagactccaagaccattcgcatcgtctac
gacattcctgccggtgtccagaccaacgagcaccccaaccctgggaagaagttcagcgca
agggggttccctcggcagtgttacctgccagacaacgaaaagggcaggaaggttctcaag
ctgctgatcacagcttgggacagacgcctcattttcaccatcggcacttccagtaccaca
ggcgagtctgacacggtggtgtggaacgagatccaccacaagaccgaattcggctccaac
ctgactggccacggctaccctgacccaaattacttggacaacgtcctgacggagctgtcg
gcccagggggttggcgaggacaacctgaaggactaa
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