Syngnathus scovelli (Gulf pipefish): 125994663
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Entry
125994663 CDS
T08785
Symbol
rorb
Name
(RefSeq) nuclear receptor ROR-beta isoform X1
KO
K08533
RAR-related orphan receptor beta
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sscv03000
]
125994663 (rorb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
sscv03310
]
125994663 (rorb)
Transcription factors [BR:
sscv03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
125994663 (rorb)
Nuclear receptors [BR:
sscv03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
125994663 (rorb)
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
DUF2716
Motif
Other DBs
NCBI-GeneID:
125994663
NCBI-ProteinID:
XP_049620023
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Position
3:complement(15035737..15056437)
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AA seq
476 aa
AA seq
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MELPIHTQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQRNCLIDR
TNRNRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQARLQEQRQQQTGEAE
ALARVYSSSLTNGLSTLNHEIGGTYANGHVIDLPKGGHANGAGLPGGYYGMDSTQPSPDQ
SGLDMSGMKHIKQEPVYDLTPVPNLFSYAGYQDSQLGHNNVSMGELDRIAQNIIKSHLET
CQYTSEELQQLAWQTHSYEEVKMYQSKPRDVLWQQCAIQITHAIQYVVEFAKRISGFMEL
CQNDQILLLKSGCLEVVLVRMSRAFNPLNNTVLFEGKYGGMQMFKALGCDDLVSAVFDFA
KSLCSLQLTEEEIALFSAAVLISTDRPWLMEPRKVQKLQEKIYFSLQHIMQKNHMDEDAL
AKLISRIPTLSALCTLHTEELQAFQQLHPETVNVLFPPLYKELFNPDPNSAMSMPK
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggagctgcctatacacactcaaatcgaagtaataccgtgcaaaatttgcggagacaaa
tcatcaggcatccactacggagtcatcacatgtgagggttgtaagggattcttccgaagg
agtcagcagaacaacgcatcctactcctgcccccgccagaggaactgcctcatcgacaga
acaaaccgcaaccgatgccaacactgccgccttcagaagtgtctagccctaggaatgtcc
agagatgcggtgaagtttggacgcatgtcaaagaaacaacgtgacagtctgtatgcagag
gtccaaaagcatcaggcccgactacaggagcagcggcaacagcagacgggggaagcggaa
gctttggcacgggtttactcatctagcctaaccaatggactgtcaaccctcaaccatgag
attgggggcacttatgccaatggtcacgtcattgacctgcccaagggtggccacgctaat
ggtgctggacttccagggggctactatgggatggattccacccagccgtctccagaccag
tcaggtttggacatgtcgggcatgaagcacataaaacaggagccagtctacgacttgacg
ccagtgcccaacctgttcagctatgctggctaccaggacagtcaactgggacacaacaac
gtcagcatgggagaactagaccgcattgctcagaatatcatcaagtctcatctggagacg
tgtcagtacacctctgaggagttgcaacagttggcctggcaaacacactcctatgaggaa
gtcaaaatgtaccagagcaagcctcgggacgtgttgtggcagcagtgtgccattcagatc
acacatgcgatccagtacgtggtagagtttgccaagcgcatctcagggtttatggagctg
tgtcaaaatgaccagatcctcctgctgaaatcaggttgtttagaggtcgtcctggtgagg
atgtccagggcattcaaccctctcaacaacaccgtgctttttgaggggaaatatggaggc
atgcagatgttcaaagctctgggttgtgatgacttagtgagcgcagtgtttgactttgcc
aagagtttgtgctcactgcagctgacggaggaggagatcgctctcttctcggcagctgtc
ctcatttccacagatcggccatggttgatggagccccgcaaagttcagaaactccaggag
aagatctacttttctctgcagcacattatgcagaagaaccacatggacgaagatgcattg
gctaagctgatcagtcgtatcccaacactgtctgctctgtgtacgctccacacggaggag
cttcaagctttccagcagcttcatccagaaacagtcaacgttctcttcccgccactctat
aaagaactgttcaatccagacccgaactctgccatgtccatgcccaagtga
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