Syngnathus scovelli (Gulf pipefish): 125994714
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Entry
125994714 CDS
T08785
Symbol
neff1
Name
(RefSeq) low molecular weight neuronal intermediate filament
KO
K04572
neurofilament light polypeptide
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sscv01009
]
125994714 (neff1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sscv04812
]
125994714 (neff1)
Protein phosphatases and associated proteins [BR:
sscv01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
125994714 (neff1)
Cytoskeleton proteins [BR:
sscv04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type IV
125994714 (neff1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
Fib_alpha
TolA_bind_tri
HR1
DUF1664
DUF2594
ACCA
Motif
Other DBs
NCBI-GeneID:
125994714
NCBI-ProteinID:
XP_049620105
LinkDB
All DBs
Position
3:11765891..11770685
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AA seq
503 aa
AA seq
DB search
MSYSSDMYSSSSYRKIFGDAPRAGRAGMGSSSSPSRVHSSGYRSRIYGSPTVISSSSYRR
TAAPGRVFSSSVQDSMMDLSQSTAVTNELKIVRTNEKEQLQGLNDRFVSFIEKVHNLEQQ
NKVLEAEVTLLRQRHNEPSRLHELYEQEIRELRARVEELTHEKSQMHLDCVQMNEALERL
REKLEEETRLREEAENTLKGYRKDVDDATLARLELEKKVESLLDEIAFLRKVHEEELQDM
QSSLQATQVSVEMDMSKPDLAAALKDIRAQYENLSCRNQAQAEEWYRSKFATVTEAAARN
QDAIKHSKEELTEYRRQVQARTLEIEALRGHNEALERQIAEMEDRHNNEIGDMQDTIQQL
EAALRSTKGEMSRHLREYQDLLNVKMALDIEIAAYRKLLEGEECRLSSVGGAMVQSGYPG
FSYMSSSRTYSLGSYRKSKPEEEEEEGEEEDKEDEDEENEEEGEDEDEGDDQESGDAEEE
EKLKEKDEKEKKKESPAEKTSKH
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgagttactccagtgatatgtatagcagcagttcctatcggaagattttcggtgatgct
cctcgtgctggccgtgcagggatgggcagcagcagcagcccgtcccgcgtgcactcctcg
gggtaccgcagccgcatctacggctcccccacggttatctcatccagcagctaccgcagg
accgccgcacccggtcgcgtcttctcgtcctccgtgcaggactccatgatggacctcagc
cagtccacagcggtcactaatgagcttaagatcgtccgaacgaacgagaaggaacaactg
caggggctcaacgaccgcttcgtgtccttcattgagaaggtgcacaacctggagcaacag
aacaaagttctcgaggcggaggtgacgttgctgcggcaacgccacaacgagccatcgcgc
ctccacgagctctacgagcaggagatccgcgagctccgcgcgcgcgtcgaggagctgacc
cacgagaagagccagatgcacctggactgcgtgcagatgaatgaggctctcgagcgcctg
cgggaaaagctcgaggaagagacccggctgcgggaggaggcggagaacaccttgaagggc
taccgcaaggacgtggacgacgccaccttggcgcgcctggagctcgagaagaaagtggag
tcactcctggatgagatcgccttcctcaggaaagttcacgaggaggagctgcaagatatg
cagtcatccctgcaggccacgcaggtgtcagtggagatggacatgagcaaaccggacctg
gcggcagccttgaaggacatcagggcccaatatgagaacctttcatgcaggaaccaggcc
caggcagaggaatggtatcgttccaagttcgcaacggtgaccgaagccgctgctcgcaac
caggatgccatcaagcactccaaagaggagctgaccgagtaccgcaggcaggtgcaagcg
cgcaccctggagattgaggcccttaggggccacaatgaggccctggagcggcagattgct
gagatggaggatcgccataacaatgaaattggtgacatgcaggacaccatccagcagctg
gaggctgcactgcgcagcaccaaaggagaaatgtcccgtcacctgagggaatatcaggat
ctgctcaatgtcaaaatggcacttgacattgaaatagctgcttataggaaactgctggaa
ggcgaggagtgccgcctcagctccgtcggtggtgccatggtgcagtccggctaccccggc
ttctcctatatgtcctcctcccgcacctactccctgggaagctacaggaagtccaagcca
gaggaagaggaagaggagggagaagaagaagacaaggaggatgaggacgaggagaacgag
gaagagggagaggatgaagatgagggagatgaccaggagtcaggtgatgctgaggaggag
gagaagctgaaagagaaggatgagaaagagaagaagaaggagagccctgctgagaagacc
agcaagcactaa
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