Syngnathus scovelli (Gulf pipefish): 125994734
Help
Entry
125994734 CDS
T08785
Symbol
zfr
Name
(RefSeq) zinc finger RNA-binding protein
KO
K13203
zinc finger RNA-binding protein
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sscv03041
]
125994734 (zfr)
Spliceosome [BR:
sscv03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
125994734 (zfr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DZF_N
DZF_C
zf-met
zf-C2H2_jaz
zf-U1
Motif
Other DBs
NCBI-GeneID:
125994734
NCBI-ProteinID:
XP_049620148
LinkDB
All DBs
Position
3:complement(8707069..8789043)
Genome browser
AA seq
1075 aa
AA seq
DB search
MIPICPVVSFTYVPSRLGEDAKMATGNYFGFTHGAAAQYSQQPAAGVAYTHPTTVASYTV
HQAPVAAHTVAAAYAPTAATVAVARPAPVAVAAATAAAYGGYQPTHATADYGYTQRQPEV
PPPPPPVTSQNYQDTYSYGRSTASAVAYDSKQYYQQPTATAVVAAAAQPQPTVAESYYQT
APKPGYSQGVTSYTQTQQTRQVTVIKPAAPSPATSSFSIYPVTSTVQPVAAAASVVPSYS
QSPTYSTNAVTYSGTSYSGYEAAVYSAASSYYQQQQQHQKQAVAAAAATAAWTGNSFTKK
PPFQNKQLRPKQPPKPPQIHYCDVCKISCAGPQTYKEHLEGQKHKKKEAALKVSQNSNSS
SGSGGGLLARSSQNQLRCELCDVSCTGADAYAAHIRGAKHQKVLKLHTKLGKPIPSTEPS
MVTQISSSSTSAPSKTITSTLNSSSTSTSSLGVAASSSGTAYLKPVSLVSSSVIGAKNQL
VSNLSASNSTTPGKKVNTPKINFVGGTKLQTTVKTEECKGETPKTAMSSSAAVDVNTEVS
ESLSASTLAALQSDVQPVGHDYVEEVRNDEGKVIRFHCKLCECSFNDPNAKEMHLKGRRH
RLQYKKKVNPDLQVEVKPSIRARKIQEEKMRKQMQKEEYWRRREEEERWRMEMRRYEEDM
YWRRMEEEQHHWDERRRGPDGGYPQGPPGPPGLLGVRPGIPGLQPQGPLHLRRPDSSDDR
YVMTKHASIYPSEEELQSIQKIVSITERALKLVSDIITDEDKIKEDDDDEKKETLKDRCD
IDRALKGVMRVGVLAKGLLLRGDKNVNLVLLCSEKPTKSLLTRIVELLPKQLTIVAPEKY
DVKGSLQEAAIILTSSTEPKMQVTITLTSPVIREENGRDGDVTSGLVKDPADVLDRQKCL
DALAALRHAKWFQARANGLQSCVIIIRILRDLCHRAPTWSSFPGWAMELLVEKAISSAAA
PLSPGDALRRVFECISSGILLSGGPGLMDPCEKTAVDTLEAIGEQEREDITLSAQVALRL
LAFRHVHKVLGMDPLPQMNTRFVVNSSRKRRHENSDGGDSFEGEGKKDKKDYDIL
NT seq
3228 nt
NT seq
+upstream
nt +downstream
nt
atgattcccatatgtcctgttgtatccttcacctatgtgcccagccggcttggtgaagat
gccaaaatggctaccggcaactactttggattcactcatggtgctgccgcacagtatagt
cagcagccagctgccggggtagcttacacccaccccacaaccgtggccagttatacagtt
catcaagcacctgtggcagctcacactgtggcagcagcctatgctcccacagcagcgacc
gtagctgttgctcggcctgcacccgtcgcagtggctgctgcgactgctgcagcatacggg
ggataccagccaacccatgctacagctgactatggctacactcagcggcagcctgaagtt
ccgccaccaccaccaccagtcacctcacaaaactaccaggacacttactcctatggccgg
tccacagcctctgctgtggcatatgacagcaagcagtactaccaacagccaactgcaact
gcagtggttgcggctgctgctcagccacaacctactgtcgcagagtcctactatcaaaca
gccccaaaaccagggtatagtcagggggtaacatcatacacccagacccagcagactcgc
caggtgacggtaataaagccagctgcgcccagtcctgcaacatcctctttctccatctac
cctgtgacctccactgtccagcccgtggctgctgccgcctctgtggtcccatcatattct
cagagtccaacgtatagcacaaatgctgtcacctactctggaacctcatattcaggatat
gaagcagcggtctattcagcagcctcaagttactaccaacaacagcagcagcaccagaaa
caggcggtggctgctgcagctgcaactgcagcatggactggaaacagtttcacgaagaaa
ccaccctttcagaataagcagctccgacccaagcagccaccaaaacccccccaaatccac
tattgtgacgtttgtaagatcagctgtgctggccctcagacttacaaggagcacctggaa
ggccagaagcacaaaaagaaggaagcagcactgaaggtttcgcaaaacagtaacagcagc
agcggtagtggtggtgggttattggcccgaagttctcaaaatcaactccgctgtgagctt
tgtgatgtttcctgcactggtgcagatgcttatgctgcccatattcggggggccaaacat
cagaaggttttgaagcttcataccaaacttggaaagccaattccctccactgaacccagc
atggtgactcaaatttcatcttcaagcacatctgccccaagcaaaaccatcacttcaaca
ttaaacagttcctctaccagcaccagctctcttggtgtggctgcctcttcatccggtact
gcatacctaaaacctgtcagcctggtcagcagtagcgtaattggtgccaagaaccaactt
gtgagcaatttgtctgcttccaactctaccacgcctggaaagaaagtcaacacccccaag
attaattttgtcggtggaactaaattgcaaaccacagtgaagactgaagagtgcaaaggc
gagacccccaagactgcaatgtcctcttcagctgctgtagatgtcaatacagaggtttca
gaatccctgtctgcatcgaccctggctgcactgcagagtgatgtccaacctgttggacat
gactatgttgaagaggtccgaaatgatgaaggcaaagtgatccgcttccattgcaagctc
tgtgaatgtagtttcaacgatccaaatgcaaaagaaatgcatttaaagggacggaggcat
cgcctgcaatacaagaaaaaggtcaacccagatttgcaggtggaggtgaagcctagcatc
agagcaaggaagattcaagaagaaaagatgagaaagcagatgcaaaaagaggaatactgg
agaagacgagaggaagaggaacgttggcgaatggaaatgcggcgatatgaagaagacatg
tattggagacgtatggaagaagaacagcaccactgggatgagcgccgtcgtggaccagat
ggagggtatccacagggtccacctggccctccgggtcttctcggagttcgacctggtatc
ccgggtttacagccacagggtcctctgcaccttcggcgacctgactcttcagatgaccgc
tatgtcatgaccaagcatgcttccatctacccctcagaggaggagctgcaatctattcag
aaaattgtgtcaatcacagagcgtgccctcaagctggtttcagacataataacagatgag
gacaagatcaaggaagatgatgacgacgaaaagaaagaaacactaaaagataggtgtgac
atcgacagagccctgaagggtgtgatgagagtgggagtcctggcaaaagggttacttctt
cggggtgacaagaatgtcaacttagtcctgctctgctcagagaagcccaccaaaagtctc
cttacacgaattgtggaactcctccctaaacagctaacaatagtagcaccagaaaaatat
gatgttaaagggtctctccaagaagcagccatcattcttacatcctctacagagccaaag
atgcaagtgaccatcactttgacttcacctgtaatcagagaggaaaatggccgggatgga
gatgtaacttcgggtttggtgaaagacccagcggacgtcttggacaggcaaaaatgcctt
gacgctctggctgctctgcgccacgctaagtggttccaggctagagcaaatggactgcag
tcatgcgtgatcatcattcggatactccgagacctctgtcatcgagctccaacctggtcg
tccttcccaggatgggccatggagctgcttgtggaaaaggccatcagtagtgccgctgca
ccgcttagcccaggcgatgcactaaggcgtgtcttcgaatgcatttcatctgggatttta
ctctctggtgggccaggactgatggatccatgtgaaaagactgctgtcgataccctagaa
gcaattggagagcaggaaagagaggacataaccttaagtgcccaggttgcgctgaggctg
ttggcattccgtcatgttcataaggttttgggcatggaccctctgccgcagatgaacact
cgtttcgttgtgaacagcagtcgcaagcgtcgccatgagaacagtgacgggggagacagc
tttgagggtgaaggcaaaaaggataagaaggattatgatattttgtaa
DBGET
integrated database retrieval system