Syngnathus scovelli (Gulf pipefish): 137839488
Help
Entry
137839488 CDS
T08785
Symbol
hoxd3a
Name
(RefSeq) homeobox protein Hox-D3a
KO
K09303
homeobox protein HoxA/B/D3
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sscv03000
]
137839488 (hoxd3a)
Transcription factors [BR:
sscv03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
137839488 (hoxd3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4074
Homeodomain
Homeobox_KN
DUF7255
Motif
Other DBs
NCBI-GeneID:
137839488
NCBI-ProteinID:
XP_049583482
LinkDB
All DBs
Position
8:9135829..9138716
Genome browser
AA seq
412 aa
AA seq
DB search
MQKATYYDNSGLFGGYTYPKADSYNYAHQSYPAANIDADYQGSVCPIQTPSGRPLTLKES
DLNGDCMRQSNSSAGSSQSNNSTNSNSSSQASNAGEQQQQQQQQPQQAGAPLPPSPGSNG
NAPQKKKSPAGSNNASPALTKQIFPWMKETRQNAKQKTNNNCPAAGEVSDEKSPTGPASK
RVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKS
KGIAHSPLGHSPDRSPPLTGANHMGYSGQLGNSLGYDAPSPPPFAKPQQNMYGLAAYTAP
LGGCMPQQKRYQNAEYEHHGMQSGATFAGANLQGSPVYVGGNFVDSMPASGPVFNLGHLP
HPSSTSVDYSCAAQIPGNHHHGPCDPHPTYTDLTSHQATQGRIQEAPKLTHL
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaagcaacatactacgacaactcgggactcttcgggggttacacgtaccccaag
gctgactcgtacaactacgcgcaccagtcctaccccgcggcaaacatcgatgcggactac
cagggctccgtgtgtcccatccagaccccctccggcaggccgctgaccctcaaggagagt
gacttaaatggggactgcatgcggcaaagcaacagcagtgctggcagcagccaaagcaac
aatagcaccaatagcaacagcagcagccaagcgtccaatgccggggagcagcagcagcaa
cagcagcagcagccacagcaggccggagccccgctgccaccctcgcccggctccaacggc
aacgcaccccagaagaagaagtctccggcggggagcaacaacgcgtcgcccgccctgacc
aagcagattttcccatggatgaaggagacccggcagaacgccaagcagaagacgaataac
aactgcccagctgctggcgaggtgagcgacgaaaagagtccgactgggccggcttccaag
cgggtccgaactgcgtacaccagcgcgcagctagtggaactggagaaggagttccacttc
aaccgctacctctgccgcccacgcagagtggagatggccaacctgctgaacctgaccgag
cgccagatcaagatctggttccagaacaggaggatgaagtacaaaaaggatcaaaagtcc
aaagggatcgcgcactcgcccctggggcactccccggatagaagcccgccgcttaccggc
gctaatcacatgggctactccggccaactgggtaactcgctgggctacgacgcaccgtct
cctccgcccttcgccaagccccagcagaacatgtacggcttggccgcttacacggccccg
ctgggcggctgcatgccgcagcagaagcgctaccagaacgccgagtacgagcaccacggc
atgcagagcggcgccaccttcgccggcgctaacctgcagggcagccccgtgtacgtgggc
gggaactttgtggattccatgccggcgtcgggccccgtgttcaacctgggccaccttccc
cacccgtcgtccaccagcgtagactacagctgcgccgcccagatcccggggaaccaccac
cacggaccctgtgacccccaccccacctacacggacctcacctcgcaccaagccactcag
ggaaggattcaggaagcgcccaaactcacgcacttgtaa
DBGET
integrated database retrieval system
