Syngnathus scovelli (Gulf pipefish): 137839489
Help
Entry
137839489 CDS
T08785
Symbol
fbxo18
Name
(RefSeq) F-box DNA helicase 1
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
F-box-like
AAA_19
UvrD_C_2
F-box
Viral_helicase1
AAA_30
AAA_12
PhoH
ResIII
AAA_22
XH
Motif
Other DBs
NCBI-GeneID:
137839489
NCBI-ProteinID:
XP_049616988
LinkDB
All DBs
Position
22:3361242..3366025
Genome browser
AA seq
988 aa
AA seq
DB search
MEFALKARAKRRHLNADELEKSEAGIQALTNPQSLSRSRGSTSNLNPRPTKRPKCASITS
STENGFPPCTNGLHGEPEDEDDERSLPSDLEEEPENNIDYLEGITSDMFEDEFDSSDELV
HEELDVEPLPDATYGLLGSSKELLQPQGCIDDLPEELLRQVLSLLPARDLYRSAILVCNR
WRDMIEDDKFMPFKKEYYRFMMNEEVTMAEVTSSLIKARVIKPAMSQHGIRNLVILMSHH
KFGTVVNPTDVLEQVKKHRFFPHAEAAMRLRIRNVPKCPNLHVEGPNPFAAMAVILLLSE
SVEDVQALVTLLNDCMSYSDVTEFLSHMAVVLLAAVRNKVKLSQRLHYNIYYVLHLRENG
PFSVSCSEGRSSRMKLTSEQLNILSHDIQKDHLVKIVAFAGTGKTTTLIKYAEQRPHLRF
LYVAFNKSVASEASQRFPPNVDCKTVHSLAYKDIGKFYQKKLTFNLNVFSINTVLPKGRG
GYAKAKVVAQTLNNFMSSVNETIERSHVPFSQVSLQGNKTLITEEEKELYVQDARNIWMK
MKDLSEIEEKAYHITHDGYLKLWQLQKPKVSLSDLYDVIFIDEAQDCTPTIMDVLLIQKC
GKILVGDPHQQIYTFRGAINALQTVAHTHIYYLTQSFRFGAEIAYVGASILTVCKDVSRI
LVGGRQKGGVFDEKAAQAQQDIANGISPRQGNTAILFRCNFGVFSEAVRLTEANNKCNIH
FIGGVDNIGLSKIKDIWYLMEGKDNRKLIKDHLIGSFAKIQPNPFEALKLYVSKTDDRDL
EAKLTIVTKYTNRIPDLVKCLRRHSQDKVKEADFILGTVHKAKGLEFEIVMVGCDFINVP
SARHNSHHFNEFSFSNVPNDEWNLLYVAVTRARTTLIITRSIHYIITQTGEYFLKSVMPA
TPLKAGETPPCLISACPNCITPGAAFMMCKRRMTYTSGPSAEGALCERCVWTRVGPIAYL
MTDDVLSMAEVPERFNQHLFHIIFHAPL
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atggaatttgcactaaaagcgagagccaagaggaggcatttaaatgcagacgagctagaa
aaaagtgaagcgggtatccaagccctcaccaacccccaaagtttaagcagaagccggggc
agcacttccaatctgaacccaagacctaccaagagaccaaaatgtgcatcaatcacctct
agtacggagaacggcttccccccatgcacaaatggactccatggcgaaccagaagatgag
gacgatgagcgatcgttgccctcagacctggaggaggagcctgaaaacaacattgactac
ttagaaggaataacttctgacatgtttgaagatgagtttgactcttctgacgagttggta
cacgaggagctggatgtggaacccctgcctgatgccacctacggtctcctcgggagtagc
aaggagctgctgcaacctcagggttgtattgatgacctcccggaggagttgctcaggcag
gtcctcagcctccttcctgctcgagacctgtacaggagcgccatactcgtgtgcaatcgg
tggcgcgacatgattgaggatgacaagtttatgcccttcaagaaagaatactaccgcttc
atgatgaacgaagaggttacaatggccgaggtcacctcctcattgatcaaggcccgcgtc
ataaagccagcaatgtcacagcacggcatccgcaacctcgttattttaatgtcgcaccat
aagtttggcacggtggtgaatccgacggacgttttggagcaagtgaagaaacatcgcttt
ttcccccatgccgaggccgccatgagattacgcattcggaatgttcccaagtgcccgaat
ctgcatgtggagggccccaacccgtttgcagccatggcggtgatcttactcctcagcgag
agcgtggaggacgtgcaggcgttggtgaccttgctgaacgactgcatgtcgtacagcgac
gtcaccgagttcctcagtcacatggccgtggtgctgctggctgccgtgaggaacaaggtg
aagcttagccagaggttgcattacaacatctactatgttcttcacctgagggagaatggc
cccttttcagttagctgctcggaaggccggagctcgcgcatgaagttgacctcagaacag
ctgaacatcctcagccacgacattcagaaggaccacttggtgaagattgttgcctttgca
ggtacggggaagacgaccacgctgatcaagtacgccgagcagcggccgcacctccgcttc
ctgtatgtggccttcaataaatcggttgctagcgaagcctcgcagcggttcccgcccaac
gtggactgcaagactgtccactcgctggcctataaagacatcgggaaattctaccaaaag
aagctcaccttcaatctgaacgtcttttccatcaacacagtcctgcccaaaggtcgaggg
ggttacgccaaggccaaagtggtagcccagactctcaacaacttcatgtcttccgtcaac
gagaccatcgagcggagccacgtgcctttctcgcaagtgagtcttcaaggcaacaagacg
ctcatcactgaagaagaaaaagagttgtatgtccaagatgcaagaaacatttggatgaaa
atgaaggacctcagtgagattgaagaaaaagcctaccacatcactcacgacggttactta
aagttatggcagctccaaaagccaaaggtcagcctctccgacctatacgacgttattttt
atcgacgaagcccaggactgcacccccaccatcatggacgtgctgctgatccagaaatgc
ggcaaaatcctggtgggcgatccccaccagcagatctacaccttccgaggtgccattaat
gctttgcagactgtggctcacacgcacatctactacctaacacagagtttccgctttggc
gccgagatcgcttacgtgggggccagcatcctcacggtgtgcaaggatgtcagcagaatt
ctcgtcgggggaaggcagaaagggggcgtgtttgatgaaaaagctgcccaggcccaacag
gacatagccaatgggataagcccccgtcagggaaacacggccattttgttcaggtgcaat
tttggcgtgttcagcgaagccgtgcggctaaccgaggccaataacaagtgcaacatccac
ttcattggcggtgtggacaacatcgggttgagtaagatcaaggacatttggtacctaatg
gaaggcaaagataaccgcaaactgatcaaggaccacctgattggatcgtttgcaaaaatc
caaccgaacccctttgaggcgttgaagctgtacgtcagcaagacggacgaccgtgacctg
gaggccaagctgaccattgtgaccaaatacacaaatcgcattcctgatctggtgaagtgc
ctgaggagacactcgcaggataaagttaaagaagcagacttcatactcggcacagtccac
aaagccaaaggtttggaatttgaaatcgtgatggtcggctgcgactttatcaacgttccc
agcgccagacacaacagccaccacttcaacgaattttcttttagtaacgttcccaacgac
gaatggaacctgctctacgtggcggtgactcgtgctcgaacgacgctcatcatcacaagg
agtatccactacatcattacccagaccggcgagtacttcttaaagtcggtaatgcccgct
acgccgctgaaagcgggcgagacgccgccgtgcctcatttccgcctgtcccaattgcatc
acgcccggcgccgctttcatgatgtgcaaaagacggatgacatatacgagtggcccgtcc
gccgagggcgcgctgtgcgagaggtgcgtgtggacacgcgtcggccccatcgcttacctc
atgacggacgacgtgctctccatggctgaagttccagagcgcttcaaccagcatttattc
cacattattttccacgcgccgctctag
DBGET
integrated database retrieval system