Staphylococcus schleiferi 2317-03: RN70_04400
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Entry
RN70_04400 CDS
T04520
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sscz
Staphylococcus schleiferi 2317-03
Pathway
sscz03420
Nucleotide excision repair
sscz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sscz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RN70_04400
03430 Mismatch repair
RN70_04400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sscz03400
]
RN70_04400
Enzymes [BR:
sscz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RN70_04400
DNA repair and recombination proteins [BR:
sscz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RN70_04400
MMR (mismatch excision repair)
Other MMR factors
RN70_04400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
ResIII
DEAD
DUF2659
Motif
Other DBs
NCBI-ProteinID:
AKS73214
LinkDB
All DBs
Position
980325..982517
Genome browser
AA seq
730 aa
AA seq
DB search
MNPLVKNMNKEQSEAVRTTEGPLLIMAGAGSGKTRVLTHRIAYLLDEKDVSPYHILAITF
TNKAAKEMKERVQALVGEAAEVIWMSTFHSMCVRILRRDADRIGIERNFTIIDPTDQKSV
IKDVLKANNIDPKKYEPRMFIGAISQLKNELKTPAHAKEEANDFYSRMVATVYEGYQKQL
IRNQALDFDDLIMTTIKLFERVPDVLDYYQNKFQYIHVDEYQDTNKAQYTLVNLIAQKFK
NLCVVGDSDQSIYGWRGADIQNILSFEEDYPNARTIYLEQNYRSTKTILTAANEVIRNNT
ERKPKGLWTANQEGEKIHYYEAVSERDETEFVVREILKQQKKGKHYKDIAVLYRTNAQSR
VLEETFMKSNVPYVMVGGQKFYDRKEIKDLLSYLRLIANSADDISLQRIINVPKRGIGPS
SVEKIATYATQNDMSMFEALAEVDFIGLSKKVTQAAATFYELMSHLMKEQEFLEISELVE
EVLEKSGYREMLEREQTLEARSRLENIDEFMSVPYDYEENTPLEEQSLINFLTDLSLVAD
VDEANLEDGVTLMTMHSAKGLEFPVVFIIGMEESIFPHIRAIKSEDDHEMEEERRISYVA
ITRAEEELYLSHASSRTLYGRPQSNPRSRFLNEIPESLLNLPEQRQSTTIGSRKKPVKRG
FSQRTVQNRNQSAVSSDWKVGDKVTHKTWGEGMVSNVNNKNGSVELDIIFKSEGPKRLLA
QFAPISKKED
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgaatccactcgtaaagaatatgaataaagaacagagtgaagcggtaagaacgacagaa
ggaccgcttttaattatggcaggtgcgggatcaggcaaaacacgtgttttaacacaccgc
attgcttatttactagatgaaaaagatgtatctccttatcacattttagccattacattt
acaaataaagcagcaaaagaaatgaaagaacgtgttcaagcgttagtgggagaagcagcc
gaagtgatttggatgtcaacttttcactcgatgtgtgtgcgtattttacgccgagatgca
gatcgaatagggattgaacgaaattttacaatcattgatcctactgatcaaaaatcagtc
ataaaagatgtgttgaaggcgaataatattgatcctaaaaagtatgagccacgtatgttt
attggtgcgattagccaattaaaaaacgaattaaaaacacctgcacatgcgaaggaagag
gcgaatgatttttatagtcgaatggtcgctacggtctatgaaggttatcaaaagcaactg
attcgaaatcaagcgttagattttgatgatttaattatgacaacaattaaattatttgag
cgcgttcctgatgtattagattattatcaaaacaaattccaatatatacatgtagatgag
tatcaagatacaaataaagcgcaatatactttagtgaatttaattgcgcaaaagtttaaa
aatttatgtgtcgtgggtgattcagatcaatccatttatggttggcgtggtgcagatata
caaaatattttatcatttgaagaagattacccaaatgcacgcacaatttatcttgaacaa
aattatcgttctactaaaaccatcttaactgcagctaatgaagtgattcgaaacaacact
gagcgtaaacctaaaggcttgtggacagccaatcaagaaggcgaaaaaattcattactac
gaagcggtaagtgaaagagatgagacagaatttgtcgtcagagagatattaaaacaacag
aagaaagggaaacattataaagatatcgcagttttataccgcacaaacgcgcaatcacgt
gtgcttgaagaaacgtttatgaaatctaatgtaccttatgtcatggtgggtggacaaaag
ttctatgatcgtaaagaaatcaaagatcttttaagttatttacgtcttatcgcaaatagt
gctgatgatatcagtttacagcgcattattaatgtgccaaaaagagggattggcccatcg
tctgttgaaaaaattgccacttatgcaactcaaaatgatatgagtatgtttgaagcgctt
gcggaggttgattttatcggtttatctaaaaaagtgactcaagctgctgcaacattttat
gaactgatgagtcatttaatgaaagagcaagagtttcttgagattagtgaattagttgaa
gaagtgcttgaaaaatctggatatcgtgaaatgttggaacgggaacaaacgttagaagcg
agaagtcgattggaaaacatcgatgaatttatgtctgttccttatgattatgaagaaaat
acaccgttagaagagcaatcattaattaactttttaacagatttatcattggttgcagat
gtggatgaagccaacttagaagatggcgttactttgatgactatgcactcagcgaaagga
ttagagttcccagttgtatttattattgggatggaagagtcaatatttccacatatacgt
gcaatcaaaagtgaagatgatcatgaaatggaagaagaacgaagaatcagttatgtggcc
atcacgcgagctgaagaagagttgtatttatcccatgcttcatctcggacgttatatgga
cgaccacaatccaatcctagatctcgttttttgaacgaaatcccagaatccctgttgaat
cttcctgaacaacgtcaatctacaacaataggatcacgtaaaaagccagttaaacgtgga
tttagccagcgtacagttcaaaatcgtaaccaatctgccgtttcatcagattggaaagta
ggggataaagtgacgcacaaaacttggggtgaaggcatggtgtccaacgtaaataataaa
aatggttcggttgaattggacattatttttaaatctgaagggcctaaacgtttgttagca
caatttgcaccgatttctaaaaaggaggattaa
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