Staphylococcus schleiferi 2317-03: RN70_05560
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Entry
RN70_05560 CDS
T04520
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
sscz
Staphylococcus schleiferi 2317-03
Pathway
sscz03030
DNA replication
sscz03410
Base excision repair
sscz03420
Nucleotide excision repair
sscz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sscz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RN70_05560
03410 Base excision repair
RN70_05560
03420 Nucleotide excision repair
RN70_05560
03440 Homologous recombination
RN70_05560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sscz03032
]
RN70_05560
03400 DNA repair and recombination proteins [BR:
sscz03400
]
RN70_05560
Enzymes [BR:
sscz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RN70_05560
DNA replication proteins [BR:
sscz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
RN70_05560
DNA repair and recombination proteins [BR:
sscz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
RN70_05560
NER (nucleotide excision repair)
GGR (global genome repair) factors
RN70_05560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
DNA_pol_A_exo1
HHH_5
WHD_BrxR
K1-lyase_N
MIER1_3_C
Motif
Other DBs
NCBI-ProteinID:
AKS73396
LinkDB
All DBs
Position
1206664..1209291
Genome browser
AA seq
875 aa
AA seq
DB search
MDKLILIDGNSLSFRAFYALPLLKNKAGIHTNAVYGFARLLEKILKEEQPTHFLVAFDAG
KTTFRHETYKEYKGGRQKTPPELSEQLPYIRQLLDVYQIKRYELENYEADDIIGTLSQAA
DEAGMQTIIITGDRDLTQLATDNVTIYYTKKGVTDVDHYTPDFISEKYNGLTPKQIIDLK
GLMGDTSDNIPGVAGVGEKTAIKLLNQFETVEGVYAHLDDVSGKKLKEKLENSHEDALMS
KQLATINCESPITVTLNDVKRPQQIDESEKVSLFKTLEFRQLLEEINIETTQETPAKEFK
VTQDIAELELAQLKEAAIHVEVAGPNYLKDDLLTFGLFDGKSYFVIPFNQLKAHSDLVQW
LEDEETEKWVYDAKKTFIAMKRNKIAIQNIRFDVMLASYIIDPSRTIDDIASVVSHFKRT
YVKDDIAIYGKGKSYHVPEDEILYAHIASILDAIHEVQPQMMEILDAHQQTALLSDIELP
LASILSEMEAVGIYTDVETLKDMEQDLQAQIDDLIQAIHDLAGEPFNINSPKQLGVILFE
KLKLPIIKKTKTGYSTAVDVLEKLQGEHPIIEYILTYRTLSKLQSTYVEGLQKVIWEDQR
IHTRFNQTLAQTGRLSSVDPNLQNIPIRLEEGRKIRKAFKSSHDDYVILAADYSQIELRV
LAHITGDPTLQKAFIDEEDVHMTTAMKVFNVDADQVTSMMRRQAKAVNFGIVYGISDYGL
SQNLGISRKEAQRFIDDYLNHFPGVKDYMDNIVQDAKQNGYVETLLKRRRYIPDITSRNF
NKRGFAERTAMNSPIQGSAADIIKLAMVNFDKKVRETEFNAKLLLQVHDELIFEVPKDEV
QAFSKFVEDIMANALELDVPLSVESDYGCTWYDAK
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
gtggataaactcatattaatagatggtaatagtctaagttttagagcattttatgccttg
ccattattaaaaaataaagctggcattcatacaaatgccgtctatggctttgcacgatta
ctagaaaagattttaaaagaagaacaaccgactcactttttagttgcgtttgatgctgga
aaaacgacatttagacatgaaacgtataaagaatataaaggaggccgtcaaaaaacaccg
cctgagcttagtgaacagttaccttatattcgtcaactgctagatgtttatcaaatcaag
cgatacgagttagaaaattatgaggctgatgatattatcggtaccttgagtcaagctgct
gatgaagcaggtatgcaaaccattattattacaggcgatcgcgatttgactcaattagcg
acagataatgtcacaatttactatacaaaaaaaggggttacggatgtcgatcactataca
ccggactttatctcagaaaaatataatggattaacgcctaagcaaattatagatttaaaa
ggattgatgggagatacatcagataatattcctggtgttgctggtgtaggtgaaaaaaca
gcaattaagcttttaaatcaatttgaaaccgtcgaaggtgtttatgcacatcttgatgac
gtatctggtaaaaagttaaaagaaaaacttgaaaacagtcatgaggatgcattaatgagt
aagcaattagcaacaatcaattgtgaaagcccgattacagtgacactaaacgatgtcaaa
cgaccacaacaaattgatgagtctgaaaaagtgtcactatttaaaacactagaatttcga
caactcttagaagaaatcaatattgaaactactcaagagacaccggcaaaagaatttaaa
gtcacacaagatattgctgaattagaattagctcaattaaaagaagcagccattcatgtt
gaggttgcaggacctaattacttaaaagatgatttactcacatttggcttatttgatgga
aaaagctattttgtcatcccatttaatcagttaaaagcgcattcagacttagttcaatgg
ttagaagatgaagagactgagaagtgggtctatgatgcaaaaaaaacatttatcgcaatg
aaacgaaataagattgcaattcaaaatattcgctttgatgtgatgctggcaagctatatc
attgatccttctagaacgatagatgatattgcttcggttgtatctcatttcaaacgtact
tatgtaaaagacgatatcgccatttacggtaaaggaaaatcgtatcacgtaccagaagac
gaaattttgtatgcacatattgcttctattttagatgcaattcatgaagtccaacctcaa
atgatggaaattttagatgcacaccagcaaacagcattgttatctgatattgaactccca
cttgcttcaatattaagtgaaatggaagcggtagggatttatacagatgtcgagacatta
aaagatatggaacaagatctacaagcgcaaatagatgatttgattcaagcgattcatgac
ctagcaggtgaaccttttaatattaactcgccaaaacagttaggtgtcattttatttgaa
aaattaaagttaccgattattaaaaaaacgaagacaggttattccacagcggtggatgtt
cttgaaaagcttcagggtgagcatccgattattgaatatattttaacttaccgcacactt
tctaaattacagtcgacatacgtcgaaggtttacaaaaagtaatttgggaggatcaacga
attcatacgcgctttaatcaaacacttgcacagacaggtcgactgtcttccgtcgatcca
aacttgcaaaatattccaattcgcttggaagaaggtcgcaaaatacgtaaagcgtttaaa
tcaagccacgatgattacgttattttagctgcggattattctcaaattgaattacgcgtt
ttagcgcatattacaggagatccgactttacaaaaagcatttatcgacgaagaagatgtt
cacatgacgacagcgatgaaagtgtttaatgttgatgcagatcaagtaacgtcaatgatg
agaagacaagcgaaagctgttaattttggaatcgtttatggcattagcgattacggctta
agtcaaaatttgggtattagccgaaaagaagcgcaacgatttatcgatgattatttgaac
cattttcctggcgtgaaagactatatggataatattgttcaagatgcgaaacaaaacggt
tatgtagaaacgcttctaaagcgtagaagatatattccggatattacgagtcgaaacttt
aataaacgaggttttgcggaacgaactgcgatgaactctccaattcaaggtagtgcagca
gatattattaaattagccatggttaattttgataaaaaagttcgtgaaactgaatttaat
gccaaactattattacaagtgcacgatgagcttatttttgaagttccgaaagatgaagtg
caagcatttagtaaatttgttgaagatattatggcaaatgcgttagaattggatgttcca
ttaagtgtagaatcagattatggatgtacttggtatgatgctaaatag
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