Staphylococcus schleiferi 2317-03: RN70_06145
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Entry
RN70_06145 CDS
T04520
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
sscz
Staphylococcus schleiferi 2317-03
Brite
KEGG Orthology (KO) [BR:
sscz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sscz03019
]
RN70_06145
03009 Ribosome biogenesis [BR:
sscz03009
]
RN70_06145
Enzymes [BR:
sscz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
RN70_06145
Messenger RNA biogenesis [BR:
sscz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
RN70_06145
Ribosome biogenesis [BR:
sscz03009
]
Prokaryotic type
rRNA helicases
RN70_06145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
AKS73507
LinkDB
All DBs
Position
1328052..1329392
Genome browser
AA seq
446 aa
AA seq
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MANHPFDQFRFDSNLIEAIKSLNFKQPTEIQQRVIPKIMKRVNLIGQSQTGTGKSHAFLL
PLFQQIDPTYEEPQAIIVAPTRELATQLYLAAQHLSQFKKNVKVSLFIGGTDFEKDKQKT
TVQPQLVIGTPTRINDLAKSGALHVHLANYLVVDEADLMIDLGLIEDVDQIASKLDEQAK
MAVFSATIPKTLYPFLNKYLEQPEFIEVKSESKNKKSIEFFLIPTKGAQKIDKTVSLIEL
LNPYLAIIFCNSRDSADALANEIQQQGIQVGMIHGGLSPRERKQQMKRIRNLDYQYVIAS
DLASRGIDIEGVSHVINFDVPKDIDFFTHRVGRTGRGNYKGIAITLYTPEEEELIHLIEQ
KGYQFENVDIKNGELKPIKAHNTRKLRQKQDDHITQQVKHKVKRNNKKKVKPGYKKKYKQ
ELEQIKRQEKRQFSRSKKRQARKNKR
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatcatccatttgaccaatttcgttttgattcaaacttaattgaagcaattaaa
tcattaaattttaaacaacccactgaaatacaacaacgtgtgattccaaaaataatgaaa
cgtgtaaatctgattggccaatcacaaacgggtacagggaaatctcatgcatttcttttg
ccgttattccaacaaattgatcccacatacgaggaaccacaagccattatcgttgcacca
acacgtgagttagcaacgcaactttacctagctgcgcaacaccttagtcaatttaaaaag
aatgtaaaagtaagcttatttattggtggaactgattttgaaaaagacaaacaaaagact
acggttcaaccccaattggtgattggtacaccaacgcgcataaacgatctcgctaaatcg
ggtgcgctacatgttcatttagcaaactatttagttgtagatgaagctgatttaatgatt
gatttaggtctcatcgaagacgtggatcaaatcgcgtctaaacttgatgaacaagcaaaa
atggctgtttttagtgcaaccattcctaagacattatatccatttttaaataaatattta
gagcaaccagaatttatcgaagttaagagtgaatcgaaaaataaaaagagtattgaattc
ttccttattcctacaaaaggcgcacaaaagatagataaaaccgtttcactaattgaactt
ttaaatccatatctcgcaattatattttgtaatagtagagacagtgcggatgcgctcgca
aatgagatacagcaacagggcattcaagttggtatgattcatggtggcttgtctccacgc
gaacgtaaacaacaaatgaagcgaatccgaaacttagattatcaatatgtgattgcaagt
gatttagcttcaagaggaatcgacattgaaggggtcagtcacgtcattaattttgatgta
cctaaagacattgacttctttacacatcgtgttggcagaacgggacgcggtaattataag
ggcattgcaattacactttatacacctgaagaagaggaactgattcatttaattgaacaa
aaaggctatcagtttgaaaatgtagatattaaaaatggtgaattaaaacctatcaaagcg
cacaatacgagaaaactacgtcaaaaacaagatgatcacattacgcaacaagtaaaacat
aaagtgaaacgtaataataagaaaaaagttaaaccagggtataagaaaaaatataagcaa
gagcttgaacagataaaacgccaagaaaaaagacagtttagcagaagtaaaaagcgacaa
gctagaaagaataaaagataa
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