Staphylococcus schleiferi 2317-03: RN70_07870
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Entry
RN70_07870 CDS
T04520
Name
(GenBank) polynucleotide phosphorylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
sscz
Staphylococcus schleiferi 2317-03
Pathway
sscz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sscz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RN70_07870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sscz03019
]
RN70_07870
03016 Transfer RNA biogenesis [BR:
sscz03016
]
RN70_07870
Enzymes [BR:
sscz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
RN70_07870
Messenger RNA biogenesis [BR:
sscz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
RN70_07870
Transfer RNA biogenesis [BR:
sscz03016
]
Prokaryotic type
tRNA degradation factors
RN70_07870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
OB_RRP5_4th
S1_2
KH-I_KHDC4-BBP
KH_PNO1_2nd
SPATA25
DUF5805
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
AKS73820
LinkDB
All DBs
Position
complement(1669025..1671124)
Genome browser
AA seq
699 aa
AA seq
DB search
MSQEKKVFKTEWANQPLTIETGQLAKQANGAVLVRYGDTVVLSTATASKEPRDGDFFPLT
VNYEEKMYAAGKIPGGFKKREGRPGDEATLTARLIDRPIRPLFPDGYRHDVQIINTVLSA
DPNCSPEMAAMIGSSMALSVSDIPFQGPIAGVNVGLVDGQYVINPNLEQKAVSRLDLEVA
GHKDAVNMVEAGASEITEAEMLEAILFGHEEIKRLCAFQEEIIAHLQPEKQEFIPEEKNQ
TLIDSVTEMTQNEGLNQAIQTVEKQEREENLDTIKERVLANFEDEEDPENEALLKEVNAI
INTLIKEEVRRLIADEKIRPDGRKPDEIRPLSSEVGLLPRAHGSGLFTRGQTQALSVLTL
GSISEYQIIDGLGEEEHKRFMHHYNFPNFSVGETGPVRAPGRREIGHGALGERALRYIIP
DEKDFPYTVRIVSEVLESNGSSSQASICGSTLALMDAGVPIKAPVAGIAMGLVTRDDQYT
ILTDIQGMEDALGDMDFKVAGTTEGITAIQMDIKIDGLTKEVIEEALEQARKGRLAILDH
MMQTINQPRTELSAYAPKVETMQIKPEKIRDVIGPGGKQINEIIDATGVKLDIEQDGTVF
IGSTEQDMINQARSWIENIVREAEVGQIYDAKVKRIEKFGAFVELFPGKDALVHISQISN
ERINKVEDVLKIGDTLNVKVTEIDKQGRVNASHKVLISQ
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaagaaaaaaaggttttcaagacggaatgggcaaaccaaccgttaacaatagaa
actggacaattggcgaaacaagcaaatggtgctgtactcgttcgatacggtgataccgtt
gtactatctacagcaacagcttcaaaagagccacgtgatggtgactttttcccgttgact
gttaattatgaagaaaaaatgtatgcggctgggaaaattccgggtggatttaaaaaaaga
gaaggacgtccaggtgatgaagctacattaactgcacgtttaattgatcgtccgatacga
ccattatttcctgatggctatcgtcatgatgtccaaatcattaacacagtattaagtgca
gatccaaattgttctcctgaaatggcagcaatgattggttcttcaatggcactgagtgtt
tctgacatcccatttcaaggtcctatcgcaggggtaaatgtcggattagttgatggccaa
tatgtcatcaatccaaacttagagcaaaaagcagtatcacgtctagacttagaagttgca
ggccataaagatgctgttaacatggttgaagcaggtgcaagtgagattactgaagctgag
atgctagaagcgatattatttggtcacgaagagattaaacgcttatgtgcatttcaagaa
gaaatcattgcacatttacaaccagaaaaacaagaatttattccagaagaaaaaaatcaa
acgcttattgattccgtaactgaaatgactcaaaatgaaggactaaatcaagcgattcaa
acggttgaaaaacaagagcgcgaagaaaaccttgatacgattaaagaacgtgtccttgca
aactttgaagacgaagaagatcctgaaaatgaggctttattaaaagaagttaatgcgatt
attaatacgttaatcaaagaagaggtaagaagattaattgcggacgaaaaaatccgtcca
gatggtcgtaagccagatgagattcgacctttatcatcagaagttggtttattaccacgt
gcccatggatctggcttgtttacacgaggtcaaacacaagcgttatctgttttaacacta
ggttcaatttcagaatatcaaatcattgatggtttgggtgaagaagagcataaacgtttt
atgcatcattacaacttcccgaacttctctgtaggtgaaacaggtcctgttcgagcaccg
gggagacgtgaaattggtcatggtgctttaggtgaacgtgcattgagatatatcattcca
gatgaaaaagatttcccatacactgtgcgtattgtaagtgaagttttagaatctaatggt
tcttcatcacaagcttctatttgtggttctactttagctttaatggacgcaggagtgccg
attaaagcaccagttgcaggtattgcaatgggtcttgtcacacgtgatgatcaatatacg
attttaacggatatccaaggcatggaagatgctttaggtgatatggacttcaaagtagcg
ggaacgactgaaggtatcacagcgattcaaatggatattaaaatagatggtttaactaaa
gaagtgattgaagaagcgcttgaacaagcacgtaaaggacgtttagcgattttagatcat
atgatgcaaactatcaatcaacctagaacagaactaagtgcttatgcacctaaagttgaa
acaatgcaaattaagcctgaaaaaattcgagacgtaattggaccaggcggtaaacaaatc
aatgaaattattgatgcgacaggtgttaaattagatattgaacaagatgggacagtattc
atcggttcaaccgaacaagatatgattaatcaagcgcgtagttggattgaaaatatcgtt
agagaagcggaagtgggacaaatttacgatgcaaaagttaaacgtattgagaaatttggc
gcttttgttgagttattcccaggtaaagatgctttagttcatatttctcaaatttcaaac
gagcgtattaataaagtagaagatgtattaaaaatcggcgatacattaaatgtaaaagtg
actgaaattgacaagcaaggccgtgtgaatgcatctcataaagtgttaatttcacaataa
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