Staphylococcus schleiferi 2317-03: RN70_11250
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Entry
RN70_11250 CDS
T04520
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
sscz
Staphylococcus schleiferi 2317-03
Pathway
sscz03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sscz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
RN70_11250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sscz03021
]
RN70_11250
03400 DNA repair and recombination proteins [BR:
sscz03400
]
RN70_11250
Enzymes [BR:
sscz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
RN70_11250
Transcription machinery [BR:
sscz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
RN70_11250
DNA repair and recombination proteins [BR:
sscz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
RN70_11250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
AKS74437
LinkDB
All DBs
Position
complement(2363186..2366806)
Genome browser
AA seq
1206 aa
AA seq
DB search
MIDVNKFHYMKIGLASPEKIRSWSYGEVKKPETINYRTLKPEKDGLFCERIFGPTKDWEC
SCGKYKRVRYKGMICDRCGVEVTKSKVRRERMGHIELAAPVSHIWYFKGIPSRMGLLLDM
SPRALEEVIYFASYVVVDPGPTGLEKKTLLSEAEFREYYDKFPGQFTAKMGAEGIKDLLD
EIDLDQELKVLRDELESATGQRLTRAIKRLEVVESFRNSGNNPAWMILDVLPIIPPEIRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPGIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIAVGPNLKMYQCGLPKE
MALELFKPFVMKELVQREIATNIKNAKSKIERTEDEVWDVLEDVIIEHPVLLNRAPTLHR
LGIQAFEPTLVEGRAIRLHPLVTTAYNADFDGDQMAVHVPLSKEAQAEARMLMLAAQNIL
NPKDGKPVVTPSQDMVLGNYYLTLERKDAVNTGMMFNDTNEVIKAYANGHVHLHTRIGVQ
ASSFNNPTFTEEQNNKILATSVGKVIFNEIIPDSFAYINEPTATNLEKNTPDKYFVDPSE
LGEGGLAEYFENTELVPPFNKKFLGNIIAEVFNRFSITDTSMMLDLMKDLGFKYSSKAGI
TVGVADIVVLPDKQEILDESEKLVERVQKQFNRGLLTEEERYNAVIEIWTNAKDKIQAKL
MKSLDKTNPIFMMSDSGARGNASNFTQLAGMRGLMAAPSGKIIELPITSSFREGLTVLEY
FISTHGARKGLADTALKTADSGYLTRRLVDVAQDVIVREEDCGTDRGLLVSDIKEGTEMI
EPFIERIEGRYSKETVRHPETGKIIIRPDELITPEIAKEITDAGIEEMYIRSAFTCNTRH
GVCEKCYGKNLATGEKVEVGEAVGTIAAQSIGEPGTQLTMRTFHTGGVAGSDITQGLPRI
QEIFEARNPKGQAVITEIEGVIDNITVGKDRQQEIVVKGANETRSYLASGTSRLKVEIGQ
SVERGEVLTEGSIEPKNFLAVAGLTATEEYLLKEVQKVYRMQGVEIDDKHVEVMVRQMLR
KVRIIEAGDTKLLPGSLVDIHNFTDANREAFKERKRPATAKPVLLGITKASLETESFLSA
ASFQETTRVLTDAAIKGKRDDLLGLKENVIIGKLIPAGTGMKRYSKVDIEKDEAPQQGLE
EQVIID
NT seq
3621 nt
NT seq
+upstream
nt +downstream
nt
ttgattgatgtaaataaattccattacatgaaaataggactcgcttcacctgaaaaaatc
cgctcttggtcatatggtgaggtcaaaaaaccagaaacaattaactatcgtactttaaaa
ccagaaaaagatggtctattctgtgaaagaattttcggacctactaaagactgggaatgt
agttgtgggaagtataaacgtgtacgttacaaaggtatgatttgtgaccgatgtggtgta
gaagtgacaaaatcaaaagtacgtcgtgaacgtatgggtcacattgagttagcagctcca
gtttcgcatatttggtattttaaaggaatcccaagccgtatgggtcttttgttagacatg
tcaccacgtgctttagaagaagttatttattttgcttcttatgtcgttgtggatccaggt
ccaacaggcttagaaaagaaaacattgctttctgaagcagaattccgtgaatattatgat
aaatttcctggtcaattcactgcaaaaatgggtgctgaagggattaaagatttattagat
gagatcgatttagatcaagaattaaaagtattacgtgacgaattggaatctgcaacaggt
caacgtttaacacgtgccatcaaacgtttagaagttgttgagtcattccgtaactctggt
aataacccagcttggatgattttagacgtacttccaattattccacctgagattcgtcca
atggttcaacttgatggtggtcgttttgctacaagtgatttgaacgacttataccgtcgt
gtgattaaccgtaacaatcgtttaaaacgtttgttagatttaggtgcgcccggaatcatc
gttcaaaacgaaaaacgtatgttacaagaagctgtggatgcgttaatcgataacggtcgt
cgtggtcgccctgtaacaggaccaggtaaccgtccattaaaatcactttcacatatgtta
aaaggtaaacaaggtcgtttccgccaaaacttgttaggtaaacgtgtagactattcaggt
cgttcagtaatcgcagtaggtccaaacttaaaaatgtaccaatgtggtttaccgaaagaa
atggcattagaattgttcaaaccgtttgtaatgaaagaattagtgcaacgtgaaattgca
acaaacattaaaaatgctaaaagtaaaattgagcgtactgaagacgaagtttgggacgtt
ttagaagatgtgattattgaacaccctgtacttttaaaccgtgcgccaacattgcacaga
ttaggaatccaagcgttcgaacctacattagttgaaggccgtgcgattcgtttgcaccca
ctcgttacaactgcctataacgcagactttgacggtgaccaaatggcggttcacgttcca
ttatctaaagaagcacaagcagaagcacgtatgttgatgcttgctgcacaaaacatccta
aaccctaaagatggtaaaccggtcgtaacaccatcacaagacatggtattaggtaactat
tatttaacgttagaacgtaaagacgctgttaatacaggaatgatgtttaacgatacgaat
gaagtaatcaaagcttatgcgaatggccatgtacatttacacacacgtattggtgtccaa
gcttcttcattcaacaaccctacatttactgaggaacaaaataacaaaattttagcgaca
tctgtaggtaaagtcatctttaacgaaattattccggactcatttgcgtacattaatgag
ccaacagcaacaaaccttgagaaaaacacaccagataaatactttgttgatccatcagaa
cttggtgaaggtggtctagctgagtactttgaaaatactgaacttgttccaccattcaac
aaaaaattcttgggtaacattatcgcagaagtattcaatcgctttagcattacagatacg
tctatgatgcttgacttgatgaaagacctaggatttaaatattcatcaaaagcaggtatt
acagtaggtgtagcagacattgttgtattaccagataaacaagaaatcttggatgagtca
gaaaaattagttgagcgtgttcaaaaacaattcaaccgtggtttattaacggaagaagaa
cgttataatgcggttattgaaatttggacaaatgcaaaagataaaatccaagctaaattg
atgaaatcacttgataaaacgaacccaatcttcatgatgagtgactcaggtgcccgtggt
aatgcatctaactttacgcaacttgcaggtatgcgtggtttaatggccgcaccatctggt
aaaatcatcgaacttccaatcacttcatcattccgtgaaggtttaacggtattagagtac
tttatctctactcacggtgcgcgtaaaggtcttgccgatacagcactgaaaactgccgac
tctggttacttgacacgtcgtcttgttgacgttgcacaagatgtcattgttcgtgaagaa
gactgtggtacagaccgtggcttactcgtttcagatattaaagaaggtactgaaatgatc
gaaccatttattgaacgtatcgaaggtcgttattcaaaagaaactgtacgtcatcctgaa
acaggtaaaattatcattcgcccagacgaattaattacaccagaaatcgctaaagaaatt
acggatgctggtattgaagaaatgtatattcgctctgcatttacatgtaacacaagacat
ggtgtctgtgaaaaatgttacggtaaaaacttggcaacaggtgaaaaagtcgaagttggt
gaagcagtaggaacaattgctgcacaatctatcggtgaacctggtacacaattaacaatg
cgtacattccacacaggtggggttgctggtagcgatattacacaaggtttaccacgtatc
caagagattttcgaagcgcgtaatcctaaaggtcaagctgttattacagaaattgaaggt
gtgattgataacatcacagttggcaaagatagacaacaagaaatagttgttaaaggtgcg
aacgaaacacgctcatatcttgcctctggtacatcacgcttgaaagtagaaattggccaa
tccgtagaacgtggtgaagtattaactgaaggttcaattgagccgaaaaacttccttgca
gttgctggtttaacagcgacagaagaatacttgcttaaagaagttcaaaaagtttatcgt
atgcaaggtgtagaaatcgacgataaacacgttgaggttatggtacgtcaaatgttacgt
aaagttcgtatcattgaagcgggggacacgaaattattaccaggatcacttgttgatatc
cataactttacagatgcgaaccgtgaagcctttaaagaacgtaagcgtcctgcgactgcg
aaaccagtcttattaggtattacaaaagcttctcttgaaacagaaagcttcttgtcagct
gcatccttccaagaaacaacacgtgttcttacagatgctgcgattaaaggtaaacgtgat
gacttactcggacttaaagaaaatgttatcattggtaaattaattcctgcaggtacgggt
atgaaacgctacagtaaagttgatattgaaaaagacgaagcgccacaacaaggccttgaa
gagcaagtcattatcgactaa
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