Staphylococcus pseudintermedius HKU10-03: SPSINT_0652
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Entry
SPSINT_0652 CDS
T01396
Name
(GenBank) ATP-dependent nuclease, subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
ssd
Staphylococcus pseudintermedius HKU10-03
Brite
KEGG Orthology (KO) [BR:
ssd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssd03400
]
SPSINT_0652
Enzymes [BR:
ssd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SPSINT_0652
DNA repair and recombination proteins [BR:
ssd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
SPSINT_0652
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
ADV05181
LinkDB
All DBs
Position
667403..670867
Genome browser
AA seq
1154 aa
AA seq
DB search
MFRTFLGRAGTGKSTQMLAEIKDKMKAQPIGHPIIIITPMQGTYLYEQVLVKDTELLGSV
RTEVLHFERLGHRIFQEVGGVHEKRLSSIAIEMMIYDILQEAQTELKLYRSQVGYMGFST
KVREQIQDFEKYAVTPEMVSDMATDAHLEPRTRHKLHDIGLIYEKLQARMSSEYITAEAM
MNRLVTLIPQSKWLKQAEIYIDGFHNFSTQEYQLIEALVKHVKSVTFALTTNGDQDALSM
FRKPSESLRHFEEMAHRVGQPLERLYFYTQHRFKAPSLTTLEQQFDALQPESHHTADEGI
RILEAPTTREEVNEVARAILRDVREKQYRYQDIAILYRDPSYVYLLDAILPQYDIPYNID
VKKSMTHHPIMEMLRALIEVLQTEWQFEPLMRLLKTNVLTQMMPDSAYLVDLLENFAIER
GIHGKRWLDPQYFELNQFRKMGIRPNDPLTEEETATFERVIDLKTKVFNQLLNFEEKLAQ
GSNAKAFATYFYEAMEGFELPNQLMTQRDMLDEQGQHEAAEEIDQIWNGLIRVLDDVVTV
FGDRDMTLTRFLEVLDVGLNELEFSMIPQTLDQVTIGTMDLAKVDNKKHVYMIGMNDGVM
PQAINGSGLISDNEKKAFETYAGVQLSPTSDILQMDEAFVCYFAMTRATETVTFSYSLMD
ASGAEREKSPFLNDIRQMFRNLDIIQLTHQHARDTLSLIEHPHQTKVHLFEAFKTWLDEG
LISDTWFTTYAVMAQYPQLNDGLTHLKSALTYNNDTVQLDGELTTQLYGKAIHASVSRFE
GYQNCPFKHYTSHGLRLNERTKYQLQNFDLGTIFHDVLKYIAEKVEGRFNQLTELQIAQL
TNDALETLLPHVQFNLLNSTSYYRYLSQRIGAIVQATLYAMKYQTSHSQFKPIAFEKSFR
KSPKDASELKAETLYTSQGMPIYIRGQIDRIDTYQKENKSFVNIIDYKSSSSSASLDLVK
VYYGLQMQMMTYMDIALQNKERLGLVEEVKPGGFLYMYVHQFRDEKRAWSDIEVAKLDEA
FLKSYQLQGLLNNDVDVLEAYDERLTAGFKSDIVPLGMKKDGSLNATSKVADEATIYKLL
EHNKQNFVDIASRIMDGHNEVAPMQYRNHLPCQYCQYQAVCHVDSMIDSPKYRRVDEKIN
PLEILAAEEEEDEV
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgaacatttttaggtcgtgctggaacgggcaaaagcacacagatgttagcagaa
attaaagacaaaatgaaagcacaaccgatagggcatcccatcattatcatcacaccgatg
caagggacgtatttgtatgaacaagtactcgtcaaagacaccgaattgttagggagtgta
cgtactgaagtgttgcactttgaacgactgggtcatcgcatttttcaagaagtaggcggg
gtgcatgaaaaacgtttgtcgtcgattgccattgaaatgatgatttacgatattttacaa
gaagcacaaacagagttgaagttgtatcgctcacaagtaggttatatgggatttagtaca
aaagtgcgtgaacaaattcaagactttgaaaagtatgctgtgacgcctgaaatggtatcg
gacatggctaccgatgcgcaccttgaaccgcgcacccgacataagctacatgacattggg
ttgatttatgaaaaactgcaagcacgtatgtcttcggaatatattacagcggaagcgatg
atgaatcgacttgtcacgctcattccacagtcgaagtggctcaaacaagcagaaatatac
atagatgggtttcataacttttctactcaagaatatcaactgattgaagctttagtgaag
catgtgaaatctgtgacgttcgcattaacgacaaacggcgatcaagatgcattaagcatg
ttccgtaagccatctgagtcgttgcgtcattttgaagagatggctcaccgtgtcggtcaa
ccactcgagcgcttgtatttttatacgcagcaccgattcaaagcaccatcattaaccacg
ttagaacagcagtttgacgcattacaacctgaaagtcatcacacagcagacgaaggtatt
cgcatattagaagcaccgacgacacgtgaagaagttaatgaagtggcacgtgcgatttta
agagatgtgcgtgaaaaacagtaccgttatcaagatattgcaatattgtatcgtgatccg
tcgtatgtctatttgttagatgcgattttgccacaatatgatattccgtacaatattgat
gtcaaaaagtcgatgacgcatcatccgattatggaaatgttgcgtgcactaatcgaagtg
ttacaaacagaatggcagtttgaaccgttgatgcgcttgttgaaaacgaatgtcttaacc
caaatgatgcctgacagtgcgtatttagtcgatttattagaaaattttgcgatagaacga
ggaattcatggcaaacgctggctcgatccacaatattttgaattgaatcaattccgtaaa
atgggtatccgaccgaatgatccactgacggaagaagagactgctacatttgaacgtgtg
atcgatttaaaaacgaaagtgtttaatcaattgttgaattttgaagaaaaattagcacaa
ggttcaaatgccaaagcttttgcgacgtatttttatgaagcgatggaaggttttgaactg
cccaatcagttaatgacgcagcgggatatgttagatgagcaaggtcaacatgaagcagcg
gaagaaattgaccaaatatggaacgggttgattcgcgtgttggatgatgtcgtgaccgtg
tttggtgaccgtgatatgacgttaacgcgctttttagaagtgttagatgtcggtttgaac
gaactcgaattttcaatgattccacaaacgttagatcaagtgacaattgggacaatggat
ttagcgaaagtcgataataaaaagcacgtttatatgatcgggatgaacgacggcgtgatg
ccccaagcgattaacggctctggtttgatctcagataatgaaaagaaagcgtttgaaacc
tatgccggtgtgcagttgagcccgacctcagatattttacaaatggatgaagcattcgtc
tgttattttgcgatgacacgtgcgacagaaacagtgacgttctcatacagtttgatggat
gcgagcggtgcagaacgagaaaaaagtccgtttttaaatgatatccgtcaaatgttccgc
aacttagatatcatccaattgacacaccagcacgcacgtgacacgttatcacttatcgaa
cacccacaccaaacgaaagtgcatctatttgaagcatttaaaacatggttagatgaagga
ttgatttcggatacgtggtttacgacttatgcagtgatggcacagtacccacaactcaat
gacgggctgacacatttgaaatcagcgctcacatacaataacgataccgtacaattggat
ggagagttgacgacacagctttacggtaaggcgattcatgcgagtgtgtcccgttttgaa
gggtaccaaaattgtccatttaaacattatacgtcacacggtttgaggctcaatgaacgg
acgaaatatcaacttcaaaactttgacttagggacaatttttcatgatgttttaaaatat
atcgccgaaaaagttgaaggacgttttaatcaactcacagagcttcaaattgcgcaattg
acgaacgacgcattagaaacattgttaccacatgtacaatttaatttgttaaactcgacg
tcgtattatcgttatttatcacagcgcatcggtgcaatagttcaagccactttatatgcg
atgaaatatcaaacgtcacattcacaatttaagcctatcgcatttgaaaagtcgttccgt
aaatcaccgaaagatgcatcagaactaaaagcagaaacgttgtatacatcacaaggcatg
ccgatttatattcgtggccaaattgaccgaatcgatacgtaccaaaaggagaataaaagt
ttcgtcaatattattgattacaaatcatcctcttcaagcgcatcactcgatttagtgaaa
gtgtattacggcttgcaaatgcaaatgatgacctatatggatatcgcgcttcaaaacaaa
gaacgtttaggtttagtggaagaagtaaaaccaggtggctttttatacatgtacgtgcat
cagtttagagacgaaaagcgtgcgtggagtgatatcgaagtggccaagttagatgaagcc
ttcttgaagtcgtatcaattacaaggattgcttaacaatgatgtagatgtattagaagcg
tatgatgaacgattgacagcgggctttaaatccgacatcgtgccactcggtatgaaaaaa
gatggcagtttgaatgcgacgagtaaagtggcggatgaagcaaccatttataaattgctc
gaacataataagcaaaactttgtggatatcgcaagtcgtattatggatggacataacgaa
gtcgcgccaatgcaataccgcaatcatttgccatgccaatattgtcaatatcaagccgtt
tgtcatgtagatagtatgattgatagtccgaaatatcgtcgagtggatgaaaaaattaat
ccccttgaaatacttgcggcagaagaagaggaggatgaagtatga
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