Staphylococcus pseudintermedius HKU10-03: SPSINT_0653
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Entry
SPSINT_0653 CDS
T01396
Name
(GenBank) ATP-dependent nuclease, subunit A
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
ssd
Staphylococcus pseudintermedius HKU10-03
Brite
KEGG Orthology (KO) [BR:
ssd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssd03400
]
SPSINT_0653
Enzymes [BR:
ssd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SPSINT_0653
DNA repair and recombination proteins [BR:
ssd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
SPSINT_0653
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
DEAD
Viral_helicase1
AAA_12
ResIII
Motif
Other DBs
NCBI-ProteinID:
ADV05182
LinkDB
All DBs
Position
670864..674508
Genome browser
AA seq
1214 aa
AA seq
DB search
MIPTKPEHVQWTDAQWESIYAKGQDVLVAAAAGSGKTAVLVERIIQRILRDGIDVDRLLV
VTFTNLSAREMKHRVEARIQQAAIEDPSNQHLKNQRTKIHQAQISTLHSFCLRLIQQHYD
VLDIDPNFRTASEVENVLLLEEVIDDVFEKHYDRLDPTFVTLTEHISTDRDDAALRLMVK
NLYDFSIANPDPIGWLHALDQPYLERHLQQHYLDILNKYVQLYLQAAQNAIEEAYHQFEL
VGDFPKHIDFIEGHRQFLRRLLSEQFIDKTALATYQLGRIPPKPKAVKEDPMLDAAYENF
KAHYEQFKNNLNAVKSTFVGRDDETLLEELQHLAPRVKYLATLTEDVIHAFSRAKRARNI
LDFSDYEHFALQILRDEQGEPSEIAALYRERFEEILVDEYQDTNRVQESIIGSIKRGDES
NGNLFMVGDVKQSIYKFRQADPSLFIEKYQRFNQPDQSSGWRIDLSQNFRSRKEVLSTTN
YLFDHMMDAEVGEIDYDAAAKLYYGAPYDEVDIPVQFNVLMVDKDREMTASEQEAYFIAQ
QVQTILETQKVYDPKTGAYRPAQYKDIVILERSYSNVRLIQQAFKDQDIPLFVNSKQGYF
EQTEIRLMLSFLRTIDNPLQDIYLVGLMRSVIYQFTEDELAKIRIVSPQDNYFYQSIQHY
MDDEAADPAIVAKLKPFLNDLARYQDYSQRHPVYQLIDKLFNDHYIIQYFSALVGGRGRR
ANLHGLFNKAVDFENSSFRGLFQFIRFIDQMIERGKDFGEENVIGPNDNVVRMMTIHSSK
GLEFPFVIYSGLTRDFNKNDLGKPVVLNQHAGLGLQYYDEARGLFYPSLISMSIDLINQK
ELISEEMRLMYVALTRAKEQLYLIGTSKKADALEMMAAATITDEKLAAIDRFNAKNPFQL
IYSILSKHQNTNIQRHQRFEVDVETLDAAVKPRLQLQHIDAGDVLPTEQDLATYQGHAIE
ALEARLAATPLDDELAQRVMQQLLYVYPYQQAVQQVSKQSVSELKRQLDTEQADTNYERV
RQYRLGVATYERPQFLQEQQHTAAEVGTLMHTVMQHLPFKEAGLTDQALNDYIESLVERS
IIRAHDVNVIVIEEIKRFIQSDLYDRIARSDEVYTELPFVVNQHQVEHTPDTTDASIIQG
MIDLVFKENDHYYFLDYKTDALIRRKGMSDEALERQLKEKYRVQMQYYQRALETILKCPV
NGYLYFFKYGELEI
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atgattccaacaaaacctgaacatgtacagtggaccgatgcacagtgggaaagtatatac
gcaaaaggtcaagatgtacttgtagcagcagcggcgggttctggtaaaacagcagtcctc
gttgaacgtattattcagcgtattttacgtgatggcattgatgttgaccgtttactcgtt
gtgacgtttacaaacttgagtgcacgcgaaatgaaacatcgtgtcgaagcgcgtatccaa
caagccgctattgaagatccttccaatcaacatttaaaaaatcaacgtacaaaaattcat
caagcacaaatttcaacgttgcatagcttttgtttacgtctcattcagcagcattacgac
gtgttggacattgatcctaattttagaactgcgagtgaagttgaaaatgtcctattgctt
gaagaagtgattgatgacgtgtttgaaaagcattacgaccgtttggatccaacatttgtg
acgttgactgagcacatttcgacggatagagatgatgccgcattacgtttaatggttaaa
aatttatatgatttcagtatcgcaaacccggatccaattggttggttacatgcgttagat
caaccttatttggagcgtcatttgcagcagcattatttagatattttaaacaagtatgtc
cagttgtatttacaagcagcacaaaatgcaatagaagaagcgtatcatcaattcgaatta
gtaggggattttcctaagcacattgattttattgagggtcaccgccaatttttgcgccga
ctattaagtgaacagtttatcgacaaaacagcattggcgacttatcaacttggccgcatc
ccacctaaaccgaaagctgtaaaagaagatccgatgcttgatgcggcttatgaaaacttt
aaagcgcattatgagcaatttaaaaacaatcttaatgcagtaaaatctacattcgttgga
cgtgatgatgagacactgcttgaggaattgcaacacttagcgccgcgtgtgaaatatttg
gccactttaactgaagatgtcattcatgcattcagtcgtgcgaaacgagcacgcaacatt
ttggacttttcagattatgaacattttgcgctacaaattttaagagatgaacaaggcgag
ccgtccgaaattgcggcgttatatcgtgaacgttttgaagaaatattagtcgacgaatat
caagatacgaaccgtgtacaagaaagtattattggcagcattaaacgaggggacgaatcg
aacggtaatttatttatggtgggcgacgtgaaacagtctatttataaatttagacaagcg
gatccgagtctgtttatcgaaaaatatcaacgttttaaccaaccagaccagtcaagtggt
tggcgcattgatttatcgcaaaatttccgttctcgtaaagaagtgctctcaacgacgaac
tatttgtttgatcatatgatggatgctgaagtgggcgaaattgactacgatgcagctgca
aaactttattatggtgcgccgtatgatgaggtcgatatccctgtgcagtttaatgtcctc
atggtcgataaagaccgagagatgaccgcgagtgagcaagaggcgtattttattgcacaa
caagtacagacgattttagaaacccaaaaagtgtatgatccgaaaacaggtgcgtatcgt
ccagcacaatataaagatatcgtcatccttgaaagaagttacagcaatgtaagacttatt
caacaagcgtttaaagatcaggatattccgctatttgtgaatagtaagcaaggttatttt
gaacaaacagaaatccgcttaatgttgtcgtttttacgtacgattgataatccgctacaa
gatatttatttagtcggtttaatgcgttcggtcatttatcaatttacagaagatgaactg
gctaagattcgtattgtatcaccgcaagataactatttttatcaatccattcaacattac
atggatgatgaagcggcggatccagcaattgtggcaaagttaaagccgtttttaaatgat
ttagcacgctaccaagactacagccaacgtcatccagtataccaactcatcgataaactg
tttaatgatcattacatcattcaatattttagtgcacttgtaggtgggcgtggccgtcgt
gcgaatttacatgggttgtttaataaagctgtcgattttgaaaattctagttttcgcggt
ttatttcaattcattcgttttatcgaccaaatgattgaacgaggcaaagattttggtgaa
gaaaatgttattggtccaaatgataatgtcgtacgtatgatgacgattcatagtagtaaa
ggtcttgaatttccatttgtcatttattcaggattaacgcgcgactttaataaaaatgat
ttaggaaaacctgttgtattgaatcaacatgcaggtctcggtttacaatattacgatgaa
gcacgaggattgttttatccatcgcttatttctatgagtatcgatctgatcaatcaaaaa
gagttaatctctgaagaaatgcgcttgatgtatgttgccttaacacgtgcgaaagaacaa
ctctacttaattgggacgtccaaaaaagcagatgcactcgagatgatggcagccgctaca
atcactgatgaaaaattagcagccattgaccgatttaacgcgaaaaacccgtttcagctg
atatacagtattttgagtaaacatcagaatacgaatattcagcgccatcaacgttttgaa
gtggatgttgagactttggatgcagctgtcaagccgcgacttcagttacaacatattgat
gcaggtgacgtgttaccaacagaacaagatttggcgacatatcaaggtcacgcgatcgaa
gcgttagaggcgagacttgcagcgaccccgttagatgatgaacttgcgcaacgtgtgatg
caacaattgttgtatgtttatccgtatcaacaagctgtacaacaagtttcaaagcaatct
gtttcagagcttaaacgtcaactcgatacagaacaagccgatacgaactatgagcgtgtc
cgacaatatcgtttaggcgtggccacgtatgagcggccgcagtttttacaagaacaacaa
catactgcagcagaagtaggaacattgatgcatacggttatgcaacatctgccatttaaa
gaagccggattaacagatcaagcattaaatgactacattgaatcattggtcgaacgttca
atcattcgcgcacatgatgtcaatgtgattgtgattgaagaaattaaacgtttcattcaa
agtgatttgtatgaccgtattgcgagaagtgacgaagtgtatacagaattgccatttgtc
gtgaatcaacatcaagtcgaacatacaccagatacgacagatgcctctattattcaaggg
atgattgacttggtctttaaagaaaatgaccattattacttcttggactataaaaccgat
gcactcattcgtcgtaaagggatgtccgatgaagcgttggaaagacaattgaaggagaaa
tatcgtgttcaaatgcaatattatcaacgtgcattagaaaccattttaaaatgcccagta
aacggctatttatacttctttaaatatggcgaactcgagatttaa
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