Staphylococcus pseudintermedius HKU10-03: SPSINT_1000
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Entry
SPSINT_1000 CDS
T01396
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ssd
Staphylococcus pseudintermedius HKU10-03
Brite
KEGG Orthology (KO) [BR:
ssd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ssd03016
]
SPSINT_1000
Enzymes [BR:
ssd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SPSINT_1000
Transfer RNA biogenesis [BR:
ssd03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SPSINT_1000
Prokaryotic type
SPSINT_1000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Nucleocapsid-N
Imm58
Motif
Other DBs
NCBI-ProteinID:
ADV05528
LinkDB
All DBs
Position
1056591..1057508
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AA seq
305 aa
AA seq
DB search
MYHGILPVYKERGLTSHDVVFKLRKILKTKKVGHTGTLDPEVDGVLPICIGQATKVSDYV
MEMGKTYRAEVTLGFSTTTEDQTGDVLAREIVTVDQFDANQVDAVLHSFKGWTTQIPPMY
SSVKVNGKKLYEYARNGETVERPKRQIHISHIARISDLIFENDIVRFSIEVTCGKGTYIR
TLATDIGRALHVPAHMSLLTRTMSGGFSLDQALTLALIEQSHHDDTLQNQLLPLAYGLKG
LPSFHVQNESDKMKIKNGQKFAKGYFNVPFEQQLVMVDSDNDDVLAIYEVHPSRQDEIKP
KKVFN
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgtatcatggtattttaccggtctataaagaacgagggttgacaagtcacgatgtcgtt
tttaaattgcgcaaaattttaaagacgaaaaaagtcggccataccgggacattagatcct
gaagtagatggcgtccttcctatttgtatcggtcaagcgacaaaagtgagcgattatgtg
atggaaatggggaaaacgtatcgcgctgaagtgacattaggtttttcaacgacgacagag
gatcaaacgggtgacgtcttggcacgtgaaatcgttacggttgaccaattcgatgccaat
caagttgatgcagtgttacactcatttaaagggtggacgacacaaattccaccaatgtat
tcgtctgtgaaagtaaatggcaaaaaattgtatgaatacgcacgcaatggtgaaacggta
gagcgccctaaacgtcaaattcatatttcgcatattgcacggatttcggacttaattttt
gaaaatgacatcgtacgtttttcaatagaagtgacttgtggcaaagggacatatattcga
acactcgcaacggatattggtcgagcactccatgtaccagcgcatatgtcattgttgaca
cggacgatgagtggtggcttcagtttagaccaagcactcactttagcattgattgaacag
tcgcatcatgacgacacactccaaaatcaattattaccacttgcatacggcttgaaagga
cttccatctttccatgttcaaaatgaaagtgataaaatgaagataaagaatggacaaaag
tttgctaaaggttattttaatgtgccatttgagcagcaacttgtcatggttgatagtgac
aatgatgatgtattagcaatttatgaagtgcatccatcacgacaagatgaaattaaaccg
aaaaaggtatttaattaa
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