Staphylococcus pseudintermedius HKU10-03: SPSINT_1017
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Entry
SPSINT_1017 CDS
T01396
Name
(GenBank) HAD superfamily hydrolase
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
ssd
Staphylococcus pseudintermedius HKU10-03
Pathway
ssd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ssd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SPSINT_1017
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssd03019
]
SPSINT_1017
Messenger RNA biogenesis [BR:
ssd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SPSINT_1017
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
Glt_symporter
PIGBOS1
Motif
Other DBs
NCBI-ProteinID:
ADV05545
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Position
1074560..1076119
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AA seq
519 aa
AA seq
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MNLLSLLLILLGIILGVVVGYFIAQNLIYQKQLQAKQTAKDILEQANKEAENLKKEKLIE
AKEENQILRERVENELRERRTELQRQESRLLQKEENLERKSDLLDKKDEILEQKESKLEE
RQQQVDAKESSVQSIIMKHEQELERISGLTQEEARKEQLSRVEDELSQDIAVLVKEKENE
AKEKVNQNAKELLATVVQRFAADHTSESTVSVVNLPNDEMKGRIIGREGRNIRTLETLTG
IDLIIDDTPEAVILSGFDPIRREIAKTALINLVSDGRIHPGRIEDMVEKSRREVDEIIRD
AGEHATFELNVHNMHPDLIKILGRMHYRTSYGQNVLKHSIEVAHLSGMLAAELNEDVTLA
KRAGLLHDIGKAIDHEVEGSHVEIGVELAKKYGEPETVINAIHSHHGDVEPTSIISILVA
AADALSAARPGARKETLENYIKRLERLEEISENYEGVEKAFAIQAGREIRVIVEPDTIDD
LKSHRLARDIKNQIEGELQYPGHIKVTVVRETRAIEYAK
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
gtgaatttattaagcctcttactcattttgctgggtatcattctaggagttgttgtaggg
tattttatcgcccaaaacttgatttaccaaaagcagttgcaagcgaagcaaactgcgaaa
gatattcttgaacaagcaaacaaagaagcagaaaaccttaaaaaagagaagttaatcgaa
gcgaaagaagaaaaccaaattctccgagaacgtgttgaaaacgaacttagagaacgacgt
actgagcttcaaaggcaagaatcccgacttcttcaaaaagaggaaaacttggagcgaaaa
tctgatctacttgataagaaggatgagattttagagcaaaaagaatctaaacttgaagaa
agacaacaacaagtagatgcaaaagagagtagtgttcaatcgataataatgaagcacgaa
caagaactagaacgcatctccggtctcacacaagaagaagcacgtaaagaacaattatcg
cgtgtagaagatgagttgtcacaagatattgcagtacttgttaaagaaaaagaaaatgaa
gcaaaagaaaaagtaaaccaaaatgctaaagagttgctcgctacagtagtgcaacgtttt
gctgcagatcatacttctgaatcaacagtttcagtagtaaacttgcctaatgatgaaatg
aaagggcgaattattggtcgtgaaggtcgaaacattcgtacattagaaacgcttacaggt
attgatttgattattgatgatacgccagaagcagttattttatcaggttttgacccgata
cgtcgagaaattgcgaaaacagcattaattaatctagtatcagatgggcgtattcatcct
ggacgcatagaagatatggttgaaaaatcaagacgtgaagtagacgaaattattcgtgac
gctggtgaacatgcaacattcgaattaaatgttcataatatgcatccagatttaattaaa
atattaggtcgtatgcattaccgtacaagttacggtcaaaatgttttgaaacattctatt
gaagttgcacatttgtcaggtatgctcgctgcagaactgaatgaagatgtgacattagcg
aaacgtgcaggtttattacatgatattggtaaggccattgaccatgaagtggaaggcagt
cacgtagaaattggtgtggagttagctaaaaaatatggcgagcctgaaacagtgattaat
gcgatacactctcatcatggtgatgtggagccaacttctatcatttcaattttagttgct
gcagctgatgcattatctgctgcaagaccaggggcaagaaaagaaacattagagaattac
atcaagcgtttagagcgtttagaagaaatctctgagaattatgaaggtgttgaaaaggcc
tttgcgattcaagcaggtcgagaaattcgtgttatagtagaacctgatacgattgatgat
ttaaaatctcaccgtttagcgcgagatattaaaaatcaaattgaaggtgaattgcaatat
ccgggtcatatcaaagtgacagtcgttcgtgagacgagagcaattgaatatgcgaaataa
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