Staphylococcus pseudintermedius HKU10-03: SPSINT_1028
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Entry
SPSINT_1028 CDS
T01396
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
ssd
Staphylococcus pseudintermedius HKU10-03
Pathway
ssd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ssd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
SPSINT_1028
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssd03400
]
SPSINT_1028
DNA repair and recombination proteins [BR:
ssd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
SPSINT_1028
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_14
ATPase_2
AAA_29
DUF7944
Motif
Other DBs
NCBI-ProteinID:
ADV05556
LinkDB
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Position
1087117..1089714
Genome browser
AA seq
865 aa
AA seq
DB search
MSNVTPMMKQYLSIKAQHQDALLFFRLGDFYEMFYDDAITASRVLEITLTKRDAKKDNPI
PMAGVPYHSADSYIETLIQNGYKVAICEQMEDPRQVKGMVKREVVRIITPGTVMEKGGVD
DTQNNYILSFVKADGYALSYCDVSTGELKVTHFEDESTLINEITTIRPNEIVVTEPLSET
LQRQLNMITETITVVEQVSDQNYSVNSLSHPLMHQAIQIVLDYIYDTQKRDMSHIEAAVE
YKALDYMKMDYYAKRNLELTESIRLKSKKGTLLWLMDKTKTPMGARRLKQWVDRPLIQQA
EIAKRHDAVDQFLHYFIERDTLRDYLTEVYDIERLVGRVSFGNVNAKDLVQLKHSIAQIP
AIKALLQSIEHEAIAHFNALEPLDDLLQVLSDSLVDEPPLSVKEGGLFKAGFNEELDQYL
DASKNGKQWLAQLQAQERERTGIKSLKISFNKVFGYYIEITRANLSQFDPSAFGYERKQT
LSNAERFITDELKEKEAIILGAQDKAIELEYQLFVALREQVKTYIERLQQQAKIISEIDC
LQSFAEIAQQYNYVRPQFSEDKTLKLVDSRHPVVERVMDYNDYVPNDCLLNTEQFIYLIT
GPNMSGKSTYMRQVAIISIMAQMGAFVPCQSATLPIFDQIFTRIGAADDLVSGKSTFMVE
MLEAQKALKYATADSLIIFDEIGRGTSTYDGLALAQAMIEYVAETSQAKTLFSTHYHELT
ELEQHLPSLKNVHVAADEYQGELIFLHKVKDGAVANSYGIQVAQLADLPEQVIARAQVIL
DTFEAHEKAQVTYTSTVDQKSVSPTSVKASTVAEEPPQFEQPTFDLFMSEAEVSEIEFEI
KQLNLSQMTPIEALVKLSELQNRLQ
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaatgtcacgccaatgatgaagcaatacttgagtattaaagcacaacatcaagat
gctttactgttttttagacttggtgatttttatgagatgttttatgacgatgcgattacg
gcgtctcgtgtgcttgaaattacattgacgaaacgcgacgctaaaaaagataatccgatt
ccaatggcgggtgtgccttatcattctgcagatagttatattgaaacgttaattcagaat
gggtataaagttgcgatttgtgaacaaatggaagatccgcgccaagtgaaagggatggtg
aaacgtgaagtcgttcgtatcattacgccaggtacagtgatggaaaaaggtggcgtggat
gatacacaaaacaactatattttaagttttgtgaaggcggatggttatgcgctaagttat
tgtgatgtgtccaccggagaattaaaggtgacgcattttgaagatgaaagtacgcttatt
aatgaaattacgacaattcgcccaaatgaaattgtcgtgactgaaccattatcagaaacg
ctacaacgtcaactgaatatgattacagaaacgattactgtcgttgaacaagtctcagat
caaaattattctgtgaacagtttgtcacatcctttaatgcatcaagcgatacaaattgtg
ttagattatatttatgatacgcaaaaaagagatatgtctcatattgaagcggctgttgaa
tacaaggcactcgattatatgaaaatggattactatgcgaaacgtaatcttgagttaaca
gaaagtattcgtttgaagtcgaaaaaagggacgttactttggttaatggacaagacgaaa
acacctatgggcgcaagaaggttgaaacagtgggttgatcgtccacttattcaacaagct
gaaattgcgaaacgacatgatgctgtcgatcaatttttacattatttcattgagcgtgac
acgttacgtgactatttaacggaagtatacgacattgaaagacttgtcggtcgtgtcagt
tttggaaatgtcaatgcgaaagatttagtgcaactcaaacattcaattgcacaaattcca
gcgattaaagcgttattgcaatcaattgaacatgaagctattgctcactttaatgcttta
gaaccgttggatgacttactgcaagtgttgtcggacagtcttgtcgatgaaccaccgctt
tcagtgaaagaaggcggtttgtttaaagcaggatttaatgaagaactcgatcaatatttg
gatgcttcgaaaaatggtaaacagtggttggcgcaattacaagcacaagaacgtgaacgc
acaggcattaaatctttaaaaattagttttaataaagtcttcggttattatatcgaaatt
acacgtgccaatttatcacaatttgatccgagtgcatttggttatgagcgaaaacaaaca
ttatccaatgcagagcgtttcattacggatgaattgaaagaaaaagaagcaattattctc
ggtgcgcaagacaaagcgattgaactcgagtatcaattgttcgtggcgttacgtgaacaa
gtaaaaacgtatattgaacgtttgcaacaacaagcaaaaatcatttcagaaattgactgt
ttacaaagttttgcagaaattgcgcaacagtataattacgtgcgaccacaatttagtgaa
gataaaacgttaaagttagtcgactctcgtcatccggttgttgaacgtgtgatggactat
aatgattatgtgccgaatgattgtctattaaatacagagcagttcatttatttaattact
ggaccgaatatgtcaggtaaatcaacgtatatgcgtcaagtggcgattattagtattatg
gcacagatgggcgcttttgttccttgtcaatccgcaacgttaccgattttcgatcaaatt
tttacacgtattggtgcggccgatgatttagtatctggtaaaagtacgtttatggtcgaa
atgttagaagcacaaaaagcattaaaatatgcgacggctgacagtttaatcatttttgat
gaaattggacgtggcacttcaacatatgacggcttagcactcgcacaagcgatgattgaa
tatgttgcagaaacgtcacaagcaaagacgttattttcaacgcattatcatgaattgaca
gagcttgaacaacatttgccaagcttgaaaaatgtacacgtggcggcggatgaatatcaa
ggtgaactcattttcttgcataaagtgaaagacggtgcagttgcgaatagttacggcatt
caagttgcacaactcgcagatttaccagaacaagtcattgcacgtgcacaagtgattttg
gatacgtttgaagcgcatgaaaaagcacaagtgacgtatacatcgaccgtggaccaaaag
tcggtcagcccgacaagtgtaaaagcatcgacagttgctgaagagccgccacaatttgaa
cagccgacgtttgatttatttatgtctgaagctgaagtaagtgaaattgagttcgaaatt
aagcaactgaatctttctcaaatgacaccgattgaagcattagtgaaattaagcgaactc
caaaatagattacaatag
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