Staphylococcus pseudintermedius HKU10-03: SPSINT_1076
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Entry
SPSINT_1076 CDS
T01396
Name
(GenBank) Exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
ssd
Staphylococcus pseudintermedius HKU10-03
Brite
KEGG Orthology (KO) [BR:
ssd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssd03400
]
SPSINT_1076
DNA repair and recombination proteins [BR:
ssd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SPSINT_1076
Archaeal homologous recombinant proteins
SPSINT_1076
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
AAA_15
SMC_N
Motif
Other DBs
NCBI-ProteinID:
ADV05604
LinkDB
All DBs
Position
1134531..1137563
Genome browser
AA seq
1010 aa
AA seq
DB search
MKPLKLHLQNFGPFLDETIDFSRIQSNQLFLISGKTGSGKTMIFDGIVYALYGRASTEKR
EVKHLRSHFAAATKPLTVTFEFEISGRLYKVVREASFLKPGNKNETKPKLEVYRHKAGRF
ELIESTIQAGERFILELLKLKQDQFRQLFVLPQGEFKEFLVSNSSDKQTILRTLFNTQLY
DMLKNRLTDKTKSMKNEIDQIYTKIQSAWDELYTLDHPDLVVEKGLKSEQYDLMMAALPQ
FETIAEQQVSKVQEEKSKVEKELNSVNEAVERQILRQQLSEQQIQLKMKLEQFEVRQLHI
QQLEQQLKLMNESKMALKMYQNLQELEVALKRQQNEYEQLQNENENLEIEQIEQQQALET
HLLQEDEMNQKAQYLERTRHFYQECKQLKEKYTRMTNIEQTIQKLMQDNEEAMQTLEAID
KDDLERQPDYEQKSQLQTEQAVLVEKVATLRIAQNHATLQARQQQQLQQYTEDLKRIDAE
IAQKQANIQVISENEQQLLNHEQAVMTLRATLSQNVPCPVCGQTVHHVEADADIEQIKKI
QQENRIIEQTLEKLKEQKIKCDANIAHTKAQLAEIGEVDFNEENLKKAETEQHDIKQKLE
AIDKENSRIATIQEEVGRIHQVIDENQQQIQLLKNEQEYIQERMDRFVAETAYDDIETFQ
SAFTQLKSAVDQFYQEKATLTERRDQLTTKIKEQQYEIQLCVHQIIERSKQVQTLNADID
EALEALNIQNRETLLDILQDSVYKEAYEQEVKTYHQEKQIVELKMQDVSQQLSAITVEDL
DDLKVKQQQQRADFEDVQRRFNEYAFQATQNQKTAQKINDEVTYLKNTLNEQIELFQLAE
ILSGKNAHNLTLENYVLMHYLEQILLKANQRLLSMTGQRYELVRNEKKGRGFSGLEIEVF
DYYSNQSRHITSLSGGETFQASLALALGLSEVVQSEQGGIALDAMFIDEGFGTLDQETLE
TALDTLIQLQSSGRLVGIISHVSELKNRIPIILEVVSKNYQSTTHLRSNE
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccattaaagttgcaccttcaaaatttcggcccatttttagatgaaacgattgat
ttttcccgtattcaatctaatcaactgtttctgattagtggtaagacaggttcaggtaaa
acgatgatttttgatgggattgtgtatgcattgtatggtcgtgcatcgacagaaaaaaga
gaagtgaaacatttaagaagtcattttgcagccgctaccaaacctttaaccgtcacgttt
gaatttgaaatttctggtagattatataaagtcgttcgtgaagcatcgtttttaaaacca
ggtaataaaaatgaaacgaaaccgaagcttgaagtgtatcgtcataaggcagggcgcttt
gaacttatagagagtacaattcaagcaggggaacgcttcattttagaacttctaaaactc
aaacaagatcagtttagacagttgttcgtattgcctcaaggggagtttaaagagttttta
gtctcaaatagttcagataagcaaactattttaaggacgctttttaatacgcaattatat
gatatgttgaaaaatcgactcactgataaaacgaaaagcatgaaaaatgaaatcgatcaa
atctataccaaaatacaaagtgcttgggatgaattgtatacactagaccatcctgattta
gtagtggaaaaaggactcaaaagtgaacaatatgatttgatgatggctgcattacctcaa
tttgaaacgattgcagaacaacaagtttcaaaagtgcaagaagaaaaatcaaaggttgaa
aaagaactaaatagtgtgaatgaagcagtagaacgtcaaattttacgccaacaattatct
gaacaacagatacaattgaagatgaaacttgagcaatttgaagtacgccaactgcacatt
cagcaacttgaacagcaattaaagttaatgaatgaaagtaaaatggcgctgaaaatgtat
caaaatcttcaagaattagaagtggcattaaaacgacaacaaaatgagtatgaacaactg
cagaatgaaaacgaaaatttagaaatagaacaaattgaacagcaacaagcgcttgaaacg
catttattacaagaagatgagatgaaccaaaaagcacagtatcttgagcgcacacgtcat
ttttatcaagagtgtaagcaattgaaagaaaaatatacacgtatgacaaacattgagcaa
acgatacaaaagttaatgcaggataatgaagaagcaatgcaaacacttgaagcgattgac
aaggacgatttagaacgccaacctgattatgaacaaaaatcacaattacaaactgaacag
gcagtgttagtagaaaaagttgcgacattacgcatcgcacaaaatcatgcaacacttcaa
gcgcgacaacaacaacagcttcaacaatacactgaggatttaaagcgaatcgatgcggag
attgctcaaaagcaggcgaatattcaagtcatctcagaaaatgaacaacagttgttgaac
catgaacaagctgttatgacattgcgcgcgacattaagtcaaaatgttccatgtccagta
tgtggtcaaacggtgcatcatgttgaagcggatgctgacatagaacaaattaaaaagatt
caacaagaaaatcgtattattgagcaaacacttgaaaagcttaaagaacaaaagattaaa
tgtgatgcaaatattgcgcacaccaaagcacaacttgctgaaatcggtgaagttgatttt
aatgaagaaaacctcaagaaggcagaaacggaacaacacgacataaaacaaaagctagag
gccatcgataaagaaaattcacgcattgcaaccattcaagaagaagttggtcgtattcat
caagtgatagacgaaaatcaacagcaaatacaattgttaaagaacgaacaagaatacatt
caagagcgtatggacagatttgttgctgaaacggcatacgacgatattgagacattccaa
tcagcctttacccaattgaaatcagctgtcgatcagttttatcaagaaaaagcaacatta
accgaacgacgtgatcaacttacaacaaagataaaagagcaacaatatgagatacaattg
tgtgtacatcaaatcattgaacgttcaaaacaagtgcaaactttaaatgccgacattgat
gaagcattggaagcattaaacattcagaatcgtgaaacattacttgatattttacaagac
agtgtttataaagaagcatatgaacaagaagtgaaaacgtatcatcaagaaaaacaaata
gtagaacttaaaatgcaagatgtgtctcagcaactgtccgcaattaccgttgaagattta
gatgatttaaaagtaaaacaacaacaacaacgtgcagattttgaagatgtacaaagacgt
tttaatgaatatgcatttcaagcgacacaaaatcaaaaaacagcacaaaaaattaatgat
gaagtgacttatttaaaaaatactctcaacgaacaaattgaattatttcaacttgctgaa
attttgagtggcaaaaatgcacataacctaacgttagaaaattacgttttaatgcattat
ttagaacagattttgttgaaagcgaatcaacgcctcctcagtatgaccggacagcgttat
gaattagtgagaaatgagaaaaaaggaagagggtttagtggtcttgagattgaggtgttt
gattactattctaaccaatcgcgtcacattacatcattgtccggtggtgaaacgttccaa
gcctcacttgcattggcgttaggattaagtgaagtcgttcaaagtgaacaaggtggcatt
gcgttagatgcgatgtttatagatgaaggatttgggacacttgatcaagaaacgttagaa
acggccctcgatactttaattcaattgcaatcgagtggtcgattagtcggtatcatttcg
cacgtttcagaactaaaaaatcgcattccgattattttagaagttgtatctaaaaactac
caaagtacaacgcatttaagaagcaatgaataa
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