Staphylococcus pseudintermedius HKU10-03: SPSINT_1231
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Entry
SPSINT_1231 CDS
T01396
Name
(GenBank) Glycine dehydrogenase (glycine cleavage system P2 protein)
KO
K00283
glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:
1.4.4.2
]
Organism
ssd
Staphylococcus pseudintermedius HKU10-03
Pathway
ssd00260
Glycine, serine and threonine metabolism
ssd00630
Glyoxylate and dicarboxylate metabolism
ssd00785
Lipoic acid metabolism
ssd01100
Metabolic pathways
ssd01110
Biosynthesis of secondary metabolites
ssd01200
Carbon metabolism
Module
ssd_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
ssd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
SPSINT_1231
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SPSINT_1231
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
SPSINT_1231
Enzymes [BR:
ssd01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
SPSINT_1231
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Gene cluster
GFIT
Motif
Pfam:
GcvP2_C
GDC-P
Aminotran_5
Beta_elim_lyase
DegT_DnrJ_EryC1
Pyridoxal_deC
DNA_pol3_finger
Motif
Other DBs
NCBI-ProteinID:
ADV05759
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Position
complement(1300505..1301977)
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AA seq
490 aa
AA seq
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MVSKSSPLIFERSRKGRFAYSLPQREIDNDVTNQLLDSKFIRKNKAEFPEVSELDLIRHY
TELSNKNFGVDSGFYPLGSCTMKYNPKINEKVARIPGFTEAHPLQDEDQIQGALEIIYSL
QEELKEITGMDEISLQPAAGAHGEWTALMIFKAYHLQNGDAERDEVIVPDSAHGTNPASA
AFAGFKSVTVKSNEKGEVDIDHLKEVVSDKTAAIMLTNPNTLGIFETNIMEIRDIVHEAG
GLLYYDGANLNAIMDKVRPGDMGFDAVHLNLHKTFTGPHGGGGPGSGPIGVKKELRDYLP
KPLVVKNGDRFEYDNDIPYSIGRVKPFYGNFGIYLRAYTYIRTMGYQGLKEVSEAAVLNA
NYMKARLKDTFVIPFDQYCKHEFVLSGTKQKKLGVRTLDMAKRLLDFGVHPPTVYFPLIV
DEGMMIEPTETESKETLDYFCDALIQIAKEAEEDPDKVLEAPHTTIIDRLDETTAARKPI
LKFENLKEEK
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atggtaagtaaatctagtccattaatttttgaacgttctagaaaaggtcgctttgcatat
tctttaccgcaaagagaaattgataacgatgttacgaatcaacttctcgattcaaaattc
attcgtaaaaataaagctgaatttcctgaagtatcagaacttgatttaattcgtcattac
actgagctttcgaataaaaactttggcgttgactcaggattctatccattaggttcgtgt
acaatgaaatataatcctaaaatcaatgaaaaagttgcacgtattccaggatttactgaa
gcacacccattacaagatgaggatcaaattcaaggtgcgttagaaatcatttacagcttg
caagaagaattaaaagaaattacaggaatggatgaaatttcactccaacctgcagcgggc
gcacatggtgaatggacagcactgatgattttcaaggcatatcacctacaaaatggcgat
gcagaaagagatgaagtcattgtacctgactcagcacatggtacgaatccagcttctgca
gcgtttgctggtttcaaatctgtcacagttaagtcgaatgaaaaaggtgaagtagatatc
gaccacctaaaagaagtcgtgagtgataaaacagctgcaattatgttaacaaacccgaat
acattaggtatttttgaaacgaatattatggaaatccgcgatattgtgcatgaagcaggg
ggcttactatactacgatggcgctaacctcaatgcaattatggataaagtacgtccagga
gacatgggatttgatgctgttcaccttaatttacacaaaacatttacagggcctcatggc
ggtggtggtccaggttcaggtccaatcggcgtgaaaaaagagttgcgtgattacttacca
aaaccactcgttgtgaaaaatggcgaccgttttgagtatgataatgacatcccatattcc
attggacgtgtgaaaccattctacggcaacttcggtatttatttacgtgcttatacgtat
attcgtacaatgggttatcaaggattgaaagaagtgtctgaagcggctgtgttaaatgcg
aactacatgaaagcgcgtttaaaagatacgttcgttattccatttgatcaatattgtaaa
catgaatttgtattaagtggtacgaagcaaaagaaactgggtgtacgtactttagatatg
gcgaaacgtttattagactttggcgttcatccacctacagtttatttcccactcattgtt
gatgaaggtatgatgatcgaaccgacagaaacagaatctaaagaaacgctagactatttt
tgtgatgccttaatccaaattgcgaaagaagctgaggaagatccagataaagtgttagaa
gcaccacatacaacaattatcgatcgtttggatgaaactacagcagcacgtaagccaatt
ttaaaatttgagaacttaaaagaagaaaagtaa
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