Staphylococcus pseudintermedius HKU10-03: SPSINT_1345
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Entry
SPSINT_1345 CDS
T01396
Name
(GenBank) MiaB family protein, possibly involved in tRNA or rRNA modification
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase [EC:
2.8.4.5
]
Organism
ssd
Staphylococcus pseudintermedius HKU10-03
Brite
KEGG Orthology (KO) [BR:
ssd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ssd03016
]
SPSINT_1345
Enzymes [BR:
ssd01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
SPSINT_1345
Transfer RNA biogenesis [BR:
ssd03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
SPSINT_1345
Prokaryotic type
Methylthiotransferases
SPSINT_1345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
B12-binding
DDE_Tnp_1_7
GspL_C
Motif
Other DBs
NCBI-ProteinID:
ADV05873
LinkDB
All DBs
Position
complement(1391696..1393045)
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AA seq
449 aa
AA seq
DB search
MSTVAFHTLGCKVNHYETEAIWQLFKDAEYNRVDFEQNADVFVINTCTVTNTGDKKSRQI
IRRAIRQNPDAVICVTGCYAQTSSAEIMEIPGVDIVVGTQDRHKLLDYIDTYQDERQPIN
GVSNIMKNRTYEELDVPYFTDRTRASLKIQEGCNNFCTFCIIPWARGLMRSRDPKKVIEQ
ATQLVNSGYKEIVLTGIHTGGYGQDLKDYNLAQLLRDLETVDGLERIRISSIEASQLTDE
VIEVLQQSQKVVRHLHIPLQSGSDSVLKRMRRKYSMAHFSERIQKLHAALPGLAVTSDVI
VGFPGETEAEFQETYDFIVNHHFSELHVFPYSPRIGTPAARMDDQIDEEIKNERVHKLIE
LSNQLAKTYASKFENDVLEVIPEEKGSQDGLLVGYADNYMKVEFVGDESLIGQICKVKVT
QAGYPINQGTLLRVVEHATNASENEKVLN
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgtctacagttgcctttcatacattagggtgtaaagtaaaccattatgaaactgaagca
atttggcagttatttaaagatgcagaatataaccgtgtggattttgaacaaaatgcggac
gtattcgtgattaatacatgtacagtaacaaatacaggtgataaaaagagtcgccaaatt
attcgacgtgcgattcgacaaaatcctgatgcggttatatgtgtgacaggatgttatgca
caaacgtcatcagctgaaattatggaaattcctggtgtcgatattgttgtcggtactcaa
gatcgtcataaattattagattacatcgatacgtatcaagatgaacgtcaaccgattaac
ggtgtaagcaatattatgaaaaatcgtacatacgaagagttagatgtcccatattttaca
gatcgaacacgtgcatcgcttaaaattcaagaaggttgtaataacttttgtacgttctgt
attattccatgggcacgtggtttaatgcgttcaagagacccaaaaaaggtaattgaacaa
gcgacacaactcgttaactcagggtataaagaaattgtgctcactggtattcatactggg
ggctacggtcaagacttgaaagactacaacctagcacaattgttaagagatttagaaaca
gttgatggcttagaacgtattcgtatttcttcaatcgaagcgagccaattaacggatgaa
gtgattgaagtattgcaacagtcacaaaaagtagtacgtcatttacacattccacttcaa
tcgggctcagacagtgtgctcaaacgtatgcgccgtaaatattcaatggctcatttttct
gaacgtattcaaaaattacacgctgcgttacctggtttagccgttacaagcgatgttatt
gttggtttcccaggtgagactgaagcagaatttcaagaaacgtatgattttatcgttaac
caccatttttctgaattacacgtctttccatattcaccacgaattggtacacctgctgca
cgtatggatgatcaaattgatgaagaaattaaaaatgaacgtgtccataaattgattgaa
ttgagcaatcaacttgctaaaacttatgcttcaaaatttgaaaatgatgtattagaagta
attccggaagaaaaaggttctcaagacggcttactcgttggctatgcagataactatatg
aaagttgaatttgtaggtgacgaatctcttattggacaaatttgcaaagtgaaagtgaca
caagccggttatccaatcaatcaagggacattactacgtgtcgttgaacatgcgacgaat
gcttcagaaaatgaaaaggtgttaaattag
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