Staphylococcus pseudintermedius HKU10-03: SPSINT_1459
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Entry
SPSINT_1459 CDS
T01396
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ssd
Staphylococcus pseudintermedius HKU10-03
Pathway
ssd03030
DNA replication
ssd03430
Mismatch repair
ssd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ssd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SPSINT_1459
03430 Mismatch repair
SPSINT_1459
03440 Homologous recombination
SPSINT_1459
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssd03032
]
SPSINT_1459
03400 DNA repair and recombination proteins [BR:
ssd03400
]
SPSINT_1459
Enzymes [BR:
ssd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SPSINT_1459
DNA replication proteins [BR:
ssd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SPSINT_1459
DNA repair and recombination proteins [BR:
ssd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SPSINT_1459
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
ADV05987
LinkDB
All DBs
Position
complement(1509707..1512898)
Genome browser
AA seq
1063 aa
AA seq
DB search
MVAHLNIHTAYDLLNSSITIEGAVQRTIELGYSAIAITDLNVMYGVPQFYDACIQHGIKP
LLGMTVYLTDQLNVLEAVVIAKNNEGLQNLFKLSSDIKVNRIKHVSIYEKKDLFNDTVVI
FKQMTNQEKHWHEEMPDGVTCFTDHQSAEDCELPKVLMQAAYYEKAEDKNALKVLHAIRD
NTKVNLVDSHETPTEHIYDVDALYDSQFAEAWLARTDEIANMCDAKLEYHQALLPEFVTP
DGSSANAYLWAELERALADFGLTEARYRKRLKYEYDVITQMGYADYFLIVSDLIRYAKSN
GVMVGPGRGSSAGSLVSYLLNITTIDPLQYDLLFERFLNPERVTMPDIDIDFEDTQREKV
IHYVQQKYGDYRVAGIVTFGHLLAKAVARDVGRVMGFDETTLSEASKLIPSKLGVTLDEA
YKEERFKAFVHRNHRHERWFEYCKKLEGLPRNTSTHAAGVIVNDQPLYQSIPLTEGETGL
LTQWTMTEAERIGLLKIDFLGLRNLTIIHQIIKQVARDLKVDIDVEQIPFDDVHVFELLS
RGDTTGIFQLESEGVRRVLQKLQPEHFEDIVAVTSLYRPGPMEEIPTYIRRRHDPSQVTY
LHPDLAPILKRTYGVIIYQEQIMQIASQFAGFSYGEADILRRAMSKKNREVLENERQHFI
DGAKEKGYAETLSGQIFDLILKFADYGFPRAHAVSYSKIAYIMTYLKVHYPAYFYANILS
NVIGNDTKTNMMIQEAKQQHITIHGPHINKSQWRYVATQEGVYISLGAIKGVGYQTVQTI
MNERREQGPYKDFFDFCNRIPGRLRSRRTLEALILTGAMDCFGKNRATLLQSIDKVSDTD
VSIDTDLLASVATIKQEYAETEEMPSQQLSDFEKQYLGFYVTAHPVEKAFKQKQYLGIFQ
LQAHVTHQPILVTLDAVRVIRTKQGQQMAFVELNDGITTMDGVIFPKTYQQLTGTLETSK
FYIIWGKFEKRNDKLQLIINRLTTLEAFEIEKRQQTRKIVIREGMTDTLEQQYLTQKQSN
NNIAVYQYQESNNQFLFKGYLLQPNLYLDALLDSIKPEHIRLL
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atggttgcacatttaaatattcatacggcttatgatcttttgaattcgagtattacgatc
gaaggggccgttcagcgcacaattgaattaggatattcagccatcgcgattaccgacttg
aatgtcatgtatggtgtgccgcagttttatgacgcgtgtattcagcatggcattaaacct
ttattagggatgactgtttacctcactgatcaattgaatgtgctagaagcggtagtcatt
gctaaaaataatgaggggttgcaaaacttatttaaattgtcatctgatattaaagtaaat
cgaattaaacatgtatccatttatgaaaagaaagatttgtttaatgatacggtcgttatt
tttaagcagatgacgaaccaagaaaagcattggcatgaagaaatgcctgacggggtaaca
tgttttacagaccatcaatcggccgaggattgtgagttgcccaaagttttgatgcaggcg
gcgtattatgaaaaggcagaagataaaaatgcgttaaaagtgttacatgcgattcgtgat
aatacgaaagtcaatttggtggattcacacgaaacaccaacagaacatatatatgatgtc
gatgcattgtatgattcgcaatttgcggaagcatggctcgcacgtacagatgaaattgcg
aatatgtgtgatgctaaactcgagtatcatcaagctttgttgcccgaatttgtaacgcca
gacggtagttcagcaaatgcttacttatgggctgagttagaacgtgcacttgcggatttt
ggactgacagaagcgcgctatcgtaaacgtttaaaatatgaatatgacgtcatcacacag
atggggtacgcggattactttttaattgtgagtgatttaattcgttatgccaaatcaaat
ggtgtcatggtcggtccaggacggggctcttcagcgggttcattagtgagttatttatta
aatatcacgacaattgacccgcttcaatatgatttactgtttgaacgttttctaaatcct
gagcgtgtgacgatgccagatatcgatattgactttgaggatacgcaacgtgaaaaagtg
attcattatgtccaacaaaagtatggtgattaccgtgttgcgggtattgtgacgtttggc
catctacttgcgaaagccgtcgcacgagatgtggggcgcgtgatgggctttgatgaaacg
acgttaagtgaagcttctaaattaattcctagtaaactgggagtcacattggatgaggcc
tataaagaagaacgttttaaagcatttgtccatcgcaatcatcgtcatgaacggtggttt
gagtattgtaaaaagttagaagggttaccgcgaaatacgtcgacgcatgcggcaggtgtc
attgtgaacgaccaaccgctatatcaatctatcccgttaacagaaggcgagacaggtttg
ctgacacaatggacgatgacggaagcagaacgcattggtttattaaaaatcgacttttta
ggactgcgaaacttaacgattattcatcaaatcatcaaacaagtggcgcgtgatttaaaa
gttgacatcgatgttgaacaaattccttttgatgatgtacacgtctttgaactattgtca
cgtggcgatacgacaggaattttccaacttgagtctgaaggtgtgcgacgtgttttacaa
aaattacagcccgaacattttgaagatatcgttgcggtgacgtctctttatcgaccgggg
ccaatggaagaaattccgacctacattcgtcgtcggcacgatccaagtcaagtcacgtat
ttgcatccagatttggcgccgattttgaaacgtacatatggagtgattatttaccaagag
cagatcatgcaaattgcgagtcagtttgcaggattttcttatggtgaagcggatatttta
cggcgtgccatgagtaaaaagaatagagaagtccttgaaaatgaacggcaacattttatt
gatggtgcaaaagaaaaaggctatgctgagacgttaagtggtcaaatttttgatttaatc
ttaaaatttgcggactacggttttccacgtgcgcacgcggtaagttattctaagattgca
tacatcatgacctatttaaaagtgcattatcctgcttatttttatgcgaacattttaagc
aacgtgattggtaatgacacgaaaacaaacatgatgattcaagaggcgaaacagcagcac
attacaattcacggtccgcatattaacaaaagtcaatggcgttatgttgcgacacaagag
ggcgtctatatttcattaggtgcgattaaaggtgtcggttatcaaacggtacaaacgata
atgaatgaaagacgtgaacaggggccttacaaagacttctttgatttctgtaatcgaatt
cccggtcgcttaagatcgcgacgtacattagaagcattgattttgacaggtgcgatggat
tgttttggcaagaaccgtgcgaccttattacaatcaattgataaggtgtcagatacagat
gtcagtattgataccgatcttctggccagtgttgcaaccattaaacaagaatatgcggaa
actgaagaaatgccgagtcaacaattaagtgatttcgaaaagcagtatttaggcttttac
gtgactgcacatcctgttgaaaaggcgtttaagcaaaaacaatatcttggtatttttcaa
cttcaagcacatgtcacgcaccaacctattttagttacattagatgctgtacgggtcatt
cgaacgaaacaaggtcaacagatggcgtttgttgagttgaatgacggcataacgacaatg
gacggtgtcatcttcccaaaaacgtatcagcaattaaccggaactttggagacatcaaag
ttttatatcatttggggcaagttcgaaaagagaaatgataaacttcaattgattatcaac
cgattgacgactttagaagcttttgaaatagaaaaaagacagcaaacgcgcaaaattgtc
attagagaaggtatgaccgatacactagagcaacagtatttaacccaaaaacaatcgaac
aacaatatcgctgtgtaccaatatcaagaaagcaacaatcaatttctatttaaaggttat
ttattgcaaccaaatctctatttagatgcacttttagactcgattaaacctgaacatatc
cgtttgttataa
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