Staphylococcus pseudintermedius HKU10-03: SPSINT_1596
Help
Entry
SPSINT_1596 CDS
T01396
Name
(GenBank) ribosomal large subunit pseudouridine synthase D, YhcT
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
ssd
Staphylococcus pseudintermedius HKU10-03
Brite
KEGG Orthology (KO) [BR:
ssd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ssd03009
]
SPSINT_1596
Enzymes [BR:
ssd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
SPSINT_1596
Ribosome biogenesis [BR:
ssd03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
SPSINT_1596
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
RluD_N
DUF7453
Motif
Other DBs
NCBI-ProteinID:
ADV06124
LinkDB
All DBs
Position
1651178..1652008
Genome browser
AA seq
276 aa
AA seq
DB search
MKFKVADTFNEQSIRDIFKTLQLPKKELHTLNMSKSITVNDEAANLQTIVHTGDEIYIPD
EDAKSQYLPSYRYAQIAYEDDFLAIVYKPKGVKTHPNDLKESNTLMNHVIYTLNHPYVEP
IHRLDQETVGLLIVAKHPIIKKILDRMLENNDIHRIYKAQVKSLLPIKPQTIDLPIGKDK
FHPNKRRVSPTGQRAVTHILSSEMIEEGVCEVMLKLDTGRTHQIRVHLAEIGYPVLGDPL
YSDSKLRQLQLESYQIEMTHPITQQPISVTIDDIKQ
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttaaagttgccgatacatttaatgaacaatccattcgtgacatatttaaaaca
ttacaattgcccaaaaaagagttgcatacattgaatatgtcaaaatctatcacagtgaat
gatgaagctgcaaatttacaaactatcgtccatacaggtgacgaaatatacattcctgat
gaagacgcgaaaagccaatatttaccgagctatcgttatgcacaaatcgcttatgaagac
gactttttagcgattgtctacaaacctaaaggcgtgaaaacacatccgaatgatttaaaa
gaaagtaatacgttaatgaaccatgtcatttatacgttgaaccacccttatgttgagcct
attcatcgtcttgaccaagagacagtcggcttacttattgtggcgaagcatccgatcatc
aaaaaaatattagatcgtatgttggaaaataatgacattcatcgtatttataaagcacaa
gtgaaaagtttattgccaattaagccacaaacgattgatttaccaattggcaaggataaa
ttccatccgaataaacgtcgtgtctctcctaccggtcaacgtgcagtgacacatattttg
tcttctgaaatgattgaagaaggtgtttgtgaagtgatgttaaagttagatactggtcgt
acacaccaaattcgtgtgcatctcgctgaaattggttatcctgtactgggggatccatta
tatagtgattcgaaattacgtcaattacagcttgaaagttatcaaattgaaatgacgcat
ccgatcacgcaacaaccgatttctgtgacgattgatgatattaaacaataa
DBGET
integrated database retrieval system
