Staphylococcus pseudintermedius HKU10-03: SPSINT_1616
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Entry
SPSINT_1616 CDS
T01396
Name
(GenBank) Lipid A export ATP-binding/permease protein MsbA
KO
K24708
ATP-binding cassette, subfamily B, putative efflux pump [EC:7.6.2.-]
Organism
ssd
Staphylococcus pseudintermedius HKU10-03
Brite
KEGG Orthology (KO) [BR:
ssd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssd02000
]
SPSINT_1616
Transporters [BR:
ssd02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
SPSINT_1616
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
RsgA_GTPase
DUF2207_C
ABC_ATPase
Prp19
AAA_22
AAA_29
NSs
AAA_15
NB-ARC
DUF5313
MMR_HSR1
Motif
Other DBs
NCBI-ProteinID:
ADV06144
LinkDB
All DBs
Position
complement(1681733..1683469)
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AA seq
578 aa
AA seq
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MIRRYLEFVKPYRWLIVGTIIVGILKFGIPLLIPLLIKYVIDDVINNAALTVDDKLMRLG
VSMLIAAFIFVVVRPPIEFFRQYLAQWTSNKILYDIRKKLYDHLQALSSKFYANNKAGEV
ISRVINDVEQTKDFIMTGLMNIWLDCITIIIALSVMFFLDVQLTLAAIVVLPFYILTVYF
FFGRLRALTRERSQKLAETQGFLHERVNGMAVIKSFAIEENEAKNFDQRNTNFLNKAFKH
TRWNAYSFSAINTVTDIGPLIVIGYGAYLAITGSVTVGTLAAFVSYLEQLYGPLRRLVSS
FTTLTQSFASMDRVFQLFDEPYDIKNAPQAKAIPIREGQIEIENVSFKYNPEERNVLNHL
NLDIQHGETVAFVGMSGGGKSTLIHLIPRFYDVTEGHIKIDGHDVKDFDTASLRRQIGMV
QQDNILFSDTVKENILLGRPDASFEEVVEAAKLANAHDFIMALPQGYDTEVGERGVKLSG
GQKQRLSIARIFLNDPPILILDEATSALDLESEAIIQEALEKLSHDRTTIIVAHRLSTIT
HADKIVVIENGEIVEQGSHETLMQREGAYRRLFSIQNL
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
ttgataagaagatatttagagtttgtaaagccgtatcgatggctgattgttggtacgatt
atagtcggaatattgaagtttggtattccattactgattccattattaatcaaatatgtc
attgatgatgttataaataatgcggctctaacagtagatgataagttaatgcgtttaggt
gtgtctatgcttatcgcggcgtttatttttgtagtagtacgtccgccgattgagtttttt
agacaatatttagcacaatggacaagtaacaaaattttatatgatattcgaaaaaaattg
tatgatcatttacaagcgttaagttcaaagttttatgcgaacaacaaagcaggtgaagtc
atttcacgtgttattaatgatgtcgaacagacgaaagatttcatcatgacggggctcatg
aatatttggcttgactgtattacgattattattgcgttgtcggtgatgtttttcttagac
gtacaactgacgttagcggcaatcgttgtcttacctttttacattttaacggtatatttc
tttttcggccgtttaagggctctgactcgtgaacgttcacaaaaacttgctgagacacaa
ggttttcttcatgaacgtgtcaatgggatggcggtcattaaaagttttgcgattgaagaa
aatgaagctaaaaatttcgatcaacgcaacacgaactttttaaacaaggcctttaaacat
acacgttggaatgcttattcattttcggctatcaacactgtgactgatattggtccatta
attgttataggttacggtgcttatttagccattacgggatctgtgacagtggggacactt
gcggcatttgtcagctaccttgaacaactatacgggccattgcgtcgacttgtgtcttct
tttacaacattaacgcaaagttttgcatcaatggatcgtgtttttcaattgtttgacgag
ccttatgatattaaaaatgcaccacaagcgaaagcgataccgattcgtgaagggcaaatt
gaaatcgaaaatgtctcatttaagtacaatccagaagagcgaaatgtattgaaccatttg
aatttggatatccaacatggcgaaacagtcgcatttgtcggtatgagtggaggcggaaag
tcaaccttaattcatcttattcctcgcttttacgatgtgacggaaggccatattaaaatt
gatggccatgacgttaaagatttcgatacggcaagtttgagacgtcaaatcggtatggtg
cagcaagacaacattttattttctgatacggtgaaagaaaatattttgctcggtcgtcca
gatgcgtcatttgaggaagttgtagaagcggcgaaactcgcaaatgcccacgactttatt
atggcattgcctcaaggttatgatacggaagtcggcgaacgtggcgtaaaactttctggt
gggcaaaaacaacgcttatcgattgctcgtattttcttaaatgatccacctatattgatt
ttagatgaagcaacaagtgcgttagatttagaaagtgaagcgattattcaagaggcgtta
gaaaagctgagtcatgaccggactactattattgtagcacatcgactttcaacgattaca
catgcagataaaattgtcgtcattgaaaatggtgaaattgtggagcaaggttcccatgag
acgttaatgcaacgagaaggcgcataccgtcgattattctcaattcaaaacttataa
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