Staphylococcus pseudintermedius HKU10-03: SPSINT_1659
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Entry
SPSINT_1659 CDS
T01396
Name
(GenBank) ATP-dependent DNA helicase UvrD/PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ssd
Staphylococcus pseudintermedius HKU10-03
Pathway
ssd03420
Nucleotide excision repair
ssd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ssd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SPSINT_1659
03430 Mismatch repair
SPSINT_1659
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssd03400
]
SPSINT_1659
Enzymes [BR:
ssd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SPSINT_1659
DNA repair and recombination proteins [BR:
ssd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SPSINT_1659
MMR (mismatch excision repair)
Other MMR factors
SPSINT_1659
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
ResIII
DEAD
T2SSE
Motif
Other DBs
NCBI-ProteinID:
ADV06187
LinkDB
All DBs
Position
complement(1729470..1731665)
Genome browser
AA seq
731 aa
AA seq
DB search
MNPLVANMNKEQSEAVRTTEGPLLIMAGAGSGKTRVLTHRIAYLLDEKDVSPYNILAITF
TNKAAKEMKERVQALVGEEAEVIWMSTFHSMCVRILRRDADRIGIERNFTIIDPTDQKSV
IKDVLKRENIDPKKYEPRIFIGEISKLKNDLLTPAKAEAEADDFYSRMVATVYKGYQQQL
VRNQALDFDDLIMTTIRLFERVPDVLDFYQNKFQYIHVDEYQDTNTAQYTLVNMLAQKFK
NLCVVGDSDQSIYGWRGANIHNILSFEKDYPNARTIFLEQNYRSTKTILQAANEVIRHNT
ERKPKGLWTANQQGEKIHYYEAMSERDETEYVVREIFKQQKKGKRYKDMAVLYRTNAQSR
VLEETFLKSNIPYVMVGGQKFYDRKEIKDLLSYLRLIANSADDISLQRIINVPKRGIGPS
SVEKIATYAVDHELTMFDALAEVDFIGLSKKVTQAAAEFYQLMSNLMQEQEFLEVSEIVD
EVLEKSGYREMLEREQSIESRSRLENIDEFMSVPVDYEKNTPLEEQSLINFLTDLSLVAD
VDGANLEDGVTLMTMHSAKGLEFPIVFIIGMEESIFPHIRAIQSESDHEMEEERRISYVA
ITRAEEELYLSHATSRTLFGRPQSNARSRFLNEIPEELLDLPERQYATTIGSRKRQPAKR
GFSQRAVKNSASSSTASNWKVGDKVMHKSWGEGMVSNVNDKNGSIELDIIFKSEGPKRLL
AQFAPIEKKED
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgaatccactcgttgcaaatatgaataaagaacagagtgaagcggtgcgcacgactgag
ggaccgcttttaattatggcaggtgcaggttctggtaaaacgagagtactcacgcatcga
attgcctatttattagatgaaaaagatgtatctccatacaatatcttagcgattactttt
acgaataaagcggcaaaggaaatgaaagaacgtgtgcaagcacttgtaggtgaagaggca
gaagtgatttggatgtcaacatttcactctatgtgtgtgcgcattttgcgacgtgacgct
gatcgtatcggtattgaacgcaactttacgataatcgatccgaccgaccaaaagtcagtc
attaaggatgttttaaaacgagaaaatatcgacccgaaaaagtatgaaccgagaattttt
attggagaaatcagtaaacttaaaaacgatttattgacacctgcaaaagctgaggcagaa
gcagatgacttttattcacgtatggtcgctacggtatacaagggctatcaacaacagctt
gttcgtaaccaagcattagatttcgatgatttgattatgacgacaattcgattgtttgaa
cgtgtgcctgacgtgttagatttttatcaaaacaaattccaatatatccatgtagatgaa
tatcaagatacgaacacagcacaatatacattggtgaatatgttagcgcaaaagtttaaa
aacctatgtgttgtaggggattcagaccagtctatttacggttggcgtggcgcaaacatt
cacaatattttatcgtttgaaaaagattatccgaatgcacgtacaatctttttagagcaa
aactatcgttcgacaaagacgattttacaagcggctaacgaggttattcgtcataatact
gaacgtaaacctaaaggactatggactgccaatcagcaaggtgaaaaaattcattattat
gaagcgatgagtgagcgtgatgaaactgaatatgtcgtgagagaaatttttaaacaacaa
aaaaagggtaaacgttataaagatatggcggtactttatcgaacaaacgcacaatcacgt
gtacttgaggaaacatttttgaaatccaacattccttatgtcatggtcggcggtcaaaag
ttctatgatcgtaaagagattaaagacttactaagttatttgcgtttaattgcgaatagt
gccgatgatatcagtttacaacgtattattaatgtgccaaagcgtggtataggaccgtct
tcagttgaaaaaatagcaacctatgctgtagatcatgaattgacaatgtttgatgcattg
gcagaagtcgacttcatcgggttatcaaaaaaggtaacacaagcggcggcagaattttat
caattgatgtcgaacttaatgcaagaacaagaatttctagaggtttcagaaattgttgat
gaagtgctcgaaaaatcagggtatcgtgaaatgttagagcgtgaacaatcaatagaatca
cgtagccgtttagaaaatattgatgaatttatgtctgtacctgtcgattatgaaaagaac
acacctttagaggagcagtcgctgattaattttttaacggacttatcattagtggcggat
gtcgacggagcgaacttagaagatggtgtgacgttaatgacgatgcactcagcgaaaggg
ctagagtttccaattgtatttattatcggtatggaagaatccattttcccgcacattcgt
gcaattcaaagtgagagtgatcacgaaatggaagaagaacgacgcatcagttatgttgcc
attacgcgtgctgaagaagagctttacttatcacatgcgacatcacgtacgttatttgga
cgtccgcaaagcaatgcgcgttcacgttttttaaatgaaattccagaagaactgcttgat
ttaccagaacgtcaatatgcaacgacgattggttcgagaaaacgtcaaccggcgaaacga
ggctttagtcaacgtgcggtgaaaaattcagcttcatcatcaacagcgtcaaattggaaa
gtcggcgataaagtgatgcataaatcatggggagaaggcatggtttcgaacgtcaatgat
aaaaatggctcaatcgagttagatattattttcaaatctgaaggacctaaacgtttactt
gctcaatttgcgcctattgaaaagaaggaggattaa
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