Staphylococcus pseudintermedius HKU10-03: SPSINT_1730
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Entry
SPSINT_1730 CDS
T01396
Name
(GenBank) RNA polymerase sigma factor SigB
KO
K03090
RNA polymerase sigma-B factor
Organism
ssd
Staphylococcus pseudintermedius HKU10-03
Brite
KEGG Orthology (KO) [BR:
ssd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssd03021
]
SPSINT_1730
Transcription machinery [BR:
ssd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SPSINT_1730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
Sigma70_ECF
HTH_16
GerE
IF2_N
HTH_3
KORA
Telomere_reg-2
DUF5638
EF-hand_15
Motif
Other DBs
NCBI-ProteinID:
ADV06258
LinkDB
All DBs
Position
complement(1812554..1813324)
Genome browser
AA seq
256 aa
AA seq
DB search
MTKESKSASAVSPEQINQWIQAYQNDEDHEAQEKLVKHYEKLIESLAYKYSKGQSHHEDL
VQVGMVGLIGAINRFDLSFDRKFEAFLVPTVIGEIKRYLRDKTWSVHVPRRIKEIGPRIK
KVSDELTNELGRSPSISEIAERLEVSDEDVLEAMEMGQSYNALSVDHSIEADKDGSTVTL
LDIMGQHDDNYELTEKRMILERILPILTDREREIIQCTFIDGLSQKETGERIGLSQMHVS
RLQRTAIKKLQEAARK
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaagagtcgaaatcagctagtgctgtttcacctgaacaaatcaaccaatggatt
caagcgtatcagaatgatgaggatcatgaagcacaagaaaaacttgtgaaacattatgaa
aaactgatcgaatccttagcttataaatactcaaaaggtcaatcacatcacgaagattta
gtacaggttggtatggtaggactgattggtgcgattaatcgatttgatttatcatttgat
agaaaattcgaagcttttttagtccccactgtcataggtgaaattaagcgctacttaagg
gataaaacatggagtgtccacgtcccacgtagaattaaagaaatagggccgagaatcaaa
aaagtgagcgatgagctaacaaatgaattaggacgttcaccgtcaatcagcgaaattgcg
gaacgtcttgaagtttcggatgaagatgtgttagaagcaatggaaatggggcaaagttat
aacgctttaagtgtcgaccattctattgaagcggataaagatggctctacagtgactttg
ttagatattatggggcaacacgatgacaattacgagttgactgagaagcgaatgatatta
gaacggatacttcctattttaacagatcgtgaaagagaaattattcaatgtacatttatc
gacggattgagtcaaaaagaaacgggagaacgtatcggattaagccagatgcatgtctcg
cgattacaaagaacagctattaagaaattgcaggaggctgcgagaaaatag
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