Candidatus Profftella armatura DC: SSDC_00285
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Entry
SSDC_00285 CDS
T02777
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ssdc
Candidatus Profftella armatura DC
Pathway
ssdc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ssdc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SSDC_00285 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssdc03021
]
SSDC_00285 (rpoA)
03400 DNA repair and recombination proteins [BR:
ssdc03400
]
SSDC_00285 (rpoA)
Enzymes [BR:
ssdc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SSDC_00285 (rpoA)
Transcription machinery [BR:
ssdc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SSDC_00285 (rpoA)
DNA repair and recombination proteins [BR:
ssdc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SSDC_00285 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RAD51D_N
DUF7219
Motif
Other DBs
NCBI-ProteinID:
AGS06752
UniProt:
S5R0M6
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All DBs
Position
44422..45399
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AA seq
325 aa
AA seq
DB search
MQNSLLKPRIIDVKTLGSNHAKVIMEPFERGYGYTLGNALRRVLLSSMIGCAPTEVIISG
ALHEYSSLEGVQEDIIDIILNLKGVILKLYNRDYAILNLKKFGKCVVLASDIELLSDIEL
VNPNHIIAHLSDNGKLDMQIKFEKGRGYIPGNIRYLTEDINKTIGRIILDASFSPVRRVS
YVVESARVEQRTDLDRLIMNIETNGVITPEEAIRQSARVLVDQLNVFAALENTPVKKELD
SSLEKVDPILLRPVDDLELTVRSANCLKAENIHCIGDLIQRSENELLRTPNLGRKSLNEI
KEILASRGLILGVRLNNWPPVEFKK
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaatagtttattgaaacctcgaataattgatgtaaaaacattaggatccaatcat
gctaaagttattatggaaccttttgaacgtggttatggttatacattaggtaatgcttta
cgtcgtgtattattgtcatctatgattggttgcgcaccaactgaagtaataatttcagga
gctttacatgagtattcttcattagaaggtgtacaagaagatataattgatattatttta
aatttaaaaggcgtaatattaaaactctataatagagattatgcaatattaaatttaaaa
aaatttggaaaatgtgttgttttagcttctgatattgaattattaagtgatattgaatta
gttaacccaaatcatattattgctcatttatctgataatggtaaactagatatgcaaatt
aaatttgaaaaaggtcgtggttatattcctggtaatatacgttatttaactgaagatatc
aataaaacaattggtcgtattattttggatgcatctttttctccagttcggagagtatct
tatgtagtagaatctgctcgtgttgagcagcgaactgatcttgatagattaattatgaat
attgaaacaaatggtgtaattactccagaagaagctattcgtcaatcagctcgtgtatta
gttgatcaattaaatgtatttgctgcattagaaaatactccagtaaaaaaagaattagat
tcatctttagaaaaagtagatccaattttgcttcgtcctgttgatgatttagaattaaca
gtacgatctgctaattgccttaaggctgaaaatattcattgcattggagatttaattcaa
cgtagtgagaatgaattgttaagaactccaaatcttggcagaaaatctttaaatgaaatt
aaagaaattttggcctctagaggtttaatattaggagtaagattaaataattggcctcca
gtcgaatttaaaaaataa
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