Candidatus Profftella armatura: SSDC_01140
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Entry
SSDC_01140 CDS
T02777
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
ssdc
Candidatus Profftella armatura
Pathway
ssdc03030
DNA replication
ssdc03430
Mismatch repair
ssdc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ssdc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SSDC_01140 (holA)
03430 Mismatch repair
SSDC_01140 (holA)
03440 Homologous recombination
SSDC_01140 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssdc03032
]
SSDC_01140 (holA)
03400 DNA repair and recombination proteins [BR:
ssdc03400
]
SSDC_01140 (holA)
Enzymes [BR:
ssdc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SSDC_01140 (holA)
DNA replication proteins [BR:
ssdc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SSDC_01140 (holA)
DNA repair and recombination proteins [BR:
ssdc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SSDC_01140 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delt_C
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
AGS06917
UniProt:
S5R141
LinkDB
All DBs
Position
complement(287241..288266)
Genome browser
AA seq
341 aa
AA seq
DB search
MFLRNIELLDKYLINSKNLSPIYTISSNEYLFLQEASDKIRKHVKHYGFHERNILTIDYL
FKWDELLKINQELSLFYNKKIIELRISNIKQISKTGECILEKYINNLNKNNITIINLPKL
DLLSQKKTWIQLLKNNFTFIEIPSIKIIDLPKWINSRLISQQQNIDKKTLNFITEQVEGN
LLAANQEIIKLFFLYGPGTLTFQQVKNSISKAAKYNIFSIKENILNGDLIRLILILQDLK
NENETFPLILWVITQEICILLKFKTAINNGKSLKNLFEKYHIYIKYQSLIEIALKRLSLD
ILKYAFYEIVQIDKELKGMHIKSYYRDPWVSLFKLIIILSS
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgtttctaagaaatatagaattattagataaatatcttataaattctaaaaatttatca
ccaatatatactatatcaagtaatgaatatctttttttacaagaagcttctgataaaatt
cgaaaacatgttaaacattatggatttcatgaaagaaatattttaacaattgattactta
tttaagtgggatgaattattaaaaataaatcaagaattatcattattttataataaaaag
ataattgaattgcgtatatccaacataaaacaaattagtaaaacaggagaatgtatatta
gaaaaatatattaataatttaaataaaaataatataacaattataaatttaccgaaattg
gatttattatcacaaaaaaaaacctggatacaattattaaaaaataattttacatttata
gaaataccttctattaaaataattgatttaccaaaatggattaattctagattaatttct
caacaacaaaatattgataaaaaaacattaaattttattactgaacaagttgagggtaat
ttattagcagcaaatcaagaaataataaaattattttttttatatggaccaggaactctt
acatttcaacaagtaaaaaattccatatcaaaagctgcaaaatataatatatttagtatt
aaagaaaatatattaaacggagatttaattcgtttaatattaattcttcaggacttaaaa
aatgaaaatgaaacttttccattaatattatgggttattacacaagaaatttgtatttta
cttaaatttaaaactgcgattaataatggcaaatctttaaaaaatttatttgaaaaatat
catatttatataaaatatcaatctttaatagaaatagcattaaaaagattgtctttagat
attttaaaatatgcattttatgaaatagttcaaattgataaagaacttaaaggaatgcat
attaaatcttattatagagacccatgggtttcattatttaaattaataataattttatca
agttaa
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