Candidatus Profftella armatura DC: SSDC_01585
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Entry
SSDC_01585 CDS
T02777
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
ssdc
Candidatus Profftella armatura DC
Pathway
ssdc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ssdc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SSDC_01585 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssdc03019
]
SSDC_01585 (groL)
03110 Chaperones and folding catalysts [BR:
ssdc03110
]
SSDC_01585 (groL)
03029 Mitochondrial biogenesis [BR:
ssdc03029
]
SSDC_01585 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssdc04147
]
SSDC_01585 (groL)
Enzymes [BR:
ssdc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
SSDC_01585 (groL)
Messenger RNA biogenesis [BR:
ssdc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
SSDC_01585 (groL)
Chaperones and folding catalysts [BR:
ssdc03110
]
Heat shock proteins
HSP60 / Chaperonin
SSDC_01585 (groL)
Mitochondrial biogenesis [BR:
ssdc03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
SSDC_01585 (groL)
Exosome [BR:
ssdc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SSDC_01585 (groL)
Exosomal proteins of other body fluids (saliva and urine)
SSDC_01585 (groL)
Exosomal proteins of breast cancer cells
SSDC_01585 (groL)
Exosomal proteins of colorectal cancer cells
SSDC_01585 (groL)
Exosomal proteins of bladder cancer cells
SSDC_01585 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AGS07001
UniProt:
S5RM30
LinkDB
All DBs
Position
complement(386674..388344)
Genome browser
AA seq
556 aa
AA seq
DB search
MASKQVIFGDDARAKIVNGVNILANAVKVTLGPKGRNVILERSFGAPIVTKDGVSVAKEI
ELKDKLENMGAQLVKEVASKTSDNAGDGTTTATVLAQAIVREGFKYVAAGFNPTDLKRGI
DKAVIAIVSEIKKISKPIMTNKEIAQVGSISANADTDIGDIIARAMDKVGKEGVITVEDG
KSLENELDIVEGMQFDRGYLSPYFINNQEKQVVALDNPYILLFDKKISNIRELLPVLEQV
AKTNKPLLIIAEDVEGEALATLVVNNIRGILKTAAVKAPGFGDRRKAMLEDIAILTGGTV
IAEEIGLTLEKTTLENLGQAIRVEIGKENTTIIDGNGKKANIEARCAQIRTQIEEATSDY
DREKLQERVAKLAGGVALIKVGAATEVEMKEKKARVEDALHATRAAVEEGIVPGGGVALL
RSRSAIQKLKGDNPDQDTGIKIVLRAIEEPLRQIVFNAGGEASVVSAKVLAGSGNYGYNA
ADGTYGDLVSLGVLDPAKVTRSALQNAASVASLILTTDALIAEISEEKTASGNSGGMDMN
SMGGGMGGMGGMGGMM
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaaaacaagtaatttttggtgatgacgctcgcgccaagatcgtaaatggagtt
aatattttggcaaacgcagtaaaagttactttaggtcccaaaggacgtaatgttattctt
gaacgcagctttggtgcaccaatagtaactaaagatggtgtttcggttgcaaaagaaatc
gaactaaaagataagctagaaaatatgggagctcaacttgttaaagaagttgcttctaaa
acttctgataatgcgggggatggtaccacaacagcaacagttcttgcgcaagctattgta
agagagggatttaaatatgtagccgcaggttttaatccaactgatttaaaacgtggtata
gataaagcggtaattgctattgtttcagaaattaaaaaaatatctaaaccaattatgact
aataaagaaattgctcaagttggatcaatttcagctaatgcagataccgatattggtgat
attattgctcgagcaatggataaagttggtaaagagggtgttattaccgtagaagatgga
aaatcattagaaaatgaattagatatagttgaaggcatgcagtttgatcgagggtattta
tctccatattttattaataatcaagaaaaacaagttgttgcactagataatccttatatt
ttactttttgataaaaaaatttcaaatattagagaattactcccagttttagagcaagtt
gctaaaactaataaaccactattaattattgctgaagacgtagaaggagaggcgttagca
actttagtagtaaataatattcgtggaatattaaaaactgctgctgttaaagcaccaggg
tttggtgatagaagaaaagcaatgttagaggatattgctattttaactggtggaacagta
attgcagaagaaattggtttaactttagaaaaaacaactttagaaaatttggggcaagca
atacgtgtagaaattggaaaagaaaatactacgattattgatggaaatggcaaaaaagct
aatattgaagcacgttgcgcgcaaattcgaactcaaattgaagaggctacatcagattat
gatcgcgaaaaattacaagaacgtgttgccaaattagctggaggcgttgctcttattaaa
gttggtgctgccacagaagtagaaatgaaagaaaaaaaagctcgtgttgaagacgcatta
catgctactcgtgcagctgttgaagaaggtatagttccaggtggaggggttgctttatta
agatctcgatctgctatacaaaaattaaaaggagataatcctgatcaagatacaggaatt
aaaattgttttacgtgctattgaagaaccattacgacaaattgtatttaatgcaggagga
gaagcatctgttgtaagcgctaaagtattagcgggttccggtaattatggttataatgct
gcggatggtacatatggcgatttagtatctttaggagttcttgatccagctaaagttact
cgatctgcattacaaaatgcagcatctgtcgcaagtttaattttaactactgatgcatta
attgcagaaatttcagaagaaaaaacagctagcggtaatagtggtggtatggatatgaat
agtatgggcggtggtatgggaggtatgggcggtatgggtggaatgatgtaa
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