Shewanella sediminis: Ssed_0090
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Entry
Ssed_0090 CDS
T00596
Name
(GenBank) Coproporphyrinogen dehydrogenase
KO
K02495
oxygen-independent coproporphyrinogen III oxidase [EC:
1.3.98.3
]
Organism
sse
Shewanella sediminis
Pathway
sse00860
Porphyrin metabolism
sse01100
Metabolic pathways
sse01110
Biosynthesis of secondary metabolites
sse01240
Biosynthesis of cofactors
Module
sse_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
Ssed_0090
Enzymes [BR:
sse01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.98 With other, known, physiological acceptors
1.3.98.3 coproporphyrinogen dehydrogenase
Ssed_0090
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Motif
Pfam:
Radical_SAM
HemN_C
Motif
Other DBs
NCBI-ProteinID:
ABV34703
UniProt:
A8FPD0
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Position
complement(100160..101500)
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AA seq
446 aa
AA seq
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MIEKYNYSGPRYTSYPTALEFDDSFTEEKLLTSIENSKSDKLSLYVHIPFCAKLCYYCGC
NKVITRHQHKADQYIEYLAAEIVKRAPLFKNYLVTQIHWGGGTPTFLSPDQILKLSALIK
SSFNVADEGEYSIEVDPREIELSMLDTLKEAGFNRISIGVQDFNKKVQIAVNREQDEQFI
FDLMAKAKELGFVSTNIDLIYGLPHQTPETFAETMQRVLDLNPDRLSVFNYAHLPARFAA
QRKIKDEDLASPQQKLDMLHQTIETLTGAGYQYIGMDHFAKPDDELSILQNEGRLHRNFQ
GYTTQEECDLLGLGVSSISQIGDCYAQNQKDIRPYYESVDKSGHALWKGCSLNRDDEIRR
VVIKQLICHFELDMAQIDEKLGINFEEYFVEDLKLLQTFIDDKLVDITDRKITISPTGRL
LIRNICICFDVYYREKARQQQFSRVI
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaaaaatacaattacagcggtccccgttatacctcttatcctactgcgctggaa
tttgatgactcttttaccgaagagaaattgctgacttcaattgaaaacagtaagagtgac
aagctttcactttacgtccacatccctttctgtgccaaactctgttattactgcggctgt
aataaggtgatcactcgccatcagcacaaagcagatcagtacattgagtaccttgcagct
gagatagtaaaacgcgcaccactattcaaaaattatttagtcactcaaatacattggggt
ggcggtacaccgaccttcttgagtcccgaccaaatcttaaaactatcggccttaatcaag
tccagcttcaatgtggctgatgagggtgagtactcgatcgaagttgacccacgtgaaatt
gagctatctatgttagatacgcttaaagaagcgggcttcaaccgtatctctatcggtgtg
caagatttcaataagaaagtccagatcgcggtaaatcgcgaacaagatgagcagttcatc
tttgacctgatggctaaggcaaaagaactcggttttgtctctaccaacatcgaccttatc
tacggcttgccacatcagacgcctgaaacgtttgcagagacgatgcaacgcgttctggac
ctgaacccggatcgcctgtctgttttcaactatgctcacctgcctgcacgctttgcagcg
cagcgtaagattaaagatgaagacttagccagccctcagcagaagctggatatgttgcat
caaaccatcgagacattgaccggcgcagggtatcaatatatcggtatggatcattttgct
aagccagatgatgagttatcgattcttcaaaatgaaggtcgtctacacagaaacttccag
ggctacactacccaggaagagtgtgatctattaggtctgggtgtatcctcaatcagccaa
attggtgattgttacgcacaaaaccaaaaagatatccgcccttactatgaatctgtagac
aagtcgggtcatgcactttggaaaggctgtagcttaaaccgcgacgatgagatccgccgt
gtggtgattaagcagttgatctgtcatttcgagctggatatggcacagatcgatgagaag
ctcggaatcaacttcgaagagtacttcgtagaagatctgaaactgctgcaaacatttatc
gatgataagctcgtcgatattacagatagaaagatcaccatcagcccaacgggtcgcttg
ctaatccgtaatatctgtatctgtttcgatgtttactatcgtgagaaagcgcgtcaacag
cagttctcaagagtgatctga
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