Shewanella sediminis: Ssed_0108
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Entry
Ssed_0108 CDS
T00596
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
sse
Shewanella sediminis
Pathway
sse00521
Streptomycin biosynthesis
sse00523
Polyketide sugar unit biosynthesis
sse00541
Biosynthesis of various nucleotide sugars
sse01100
Metabolic pathways
sse01110
Biosynthesis of secondary metabolites
sse01250
Biosynthesis of nucleotide sugars
Module
sse_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
Ssed_0108
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
Ssed_0108
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
Ssed_0108
Enzymes [BR:
sse01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
Ssed_0108
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Motif
Pfam:
dTDP_sugar_isom
Polysacc_synt_C
Motif
Other DBs
NCBI-ProteinID:
ABV34721
UniProt:
A8FPE8
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Position
complement(122040..122612)
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AA seq
190 aa
AA seq
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MKVIDTPIADLKIIEPNLFGDERGFFFESFRDSWFREHVSDVHFVQENHSRSKRGILRGL
HYQSSQTQGKLVRVISGEVFDVAVDLRRESTTYGQWFGTYLSEENRRQLWIPAGFAHGFY
VISESADCIYKCTDYYAPEFEKTIIWNDTELSVDWPLSRVNRSKTDDIAQPILSAKDSAG
LAFNSREHWL
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtcatcgacacccccattgcagatctcaagattatcgaacccaatctatttggc
gatgagagaggtttcttcttcgagtcatttcgggactcctggttcagggagcatgtcagt
gatgttcactttgttcaggaaaaccacagtagatccaagcgagggatattgagggggctg
cactatcaatccagccagactcagggaaaactggtgcgtgtcatctccggagaggttttc
gatgtagccgtcgatctgcgcagagagagcaccacatacggacagtggttcggtacctac
cttagcgaagaaaacagacgccaactctggatcccggcagggtttgcccacggcttctat
gtcatctcagaatcggcagactgtatctataaatgtaccgattactacgcgccggagttc
gaaaaaaccatcatctggaacgatactgagttatcggtagattggccactctccagagtc
aacagatcgaagaccgacgacatagcgcagcccatactgtcggcaaaggacagcgcgggg
ctagcatttaacagtcgggagcactggctatga
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