Shewanella sediminis: Ssed_0139
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Entry
Ssed_0139 CDS
T00596
Name
(GenBank) Histidine kinase
Organism
sse
Shewanella sediminis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
Response_reg
HisKA
HAMP
Hpt
HATPase_c_3
DUF2247
CHASE3
Motif
Other DBs
NCBI-ProteinID:
ABV34752
UniProt:
A8FPH9
LinkDB
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Position
complement(154595..157789)
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AA seq
1064 aa
AA seq
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MPFRLLTQWLSLTSIGSKVILSMAGISLLVLMLSASNFIMNTRVKEDTTEVSTHEIPKAI
AAINMLDEIGDMNSNILEYVLGEVDERDDFDQNQITFLQYLATLKSALKAHDRRIDEIEE
LFNDFHTSARANVFNRYNPNNEAWAKQRVDGLTNVTGHKLEVLLDSLKESEIKDVGSQPD
LNEVIHDDLPGVRYYLELVDEAGDMTANLTEYISGIYEAKNAFIENAQDFEEYLTKLQPL
EQKPEEIALLAEVEALYKVLRDGGFEVFQRYNSSNKLEAITAIDELEHQTFARLERLLDD
VSIDAERNTNLELLGLRQMTISNQYVLIVSLFLVLSLCISIIYFSYRIITRPITKLSSTM
KQLADGDTEVDVVYRDRQDEVGNMAQAVEVFKTNMIARNAAEQELVMAKDNAEAASKAKA
SFLATMSHEIRTPMNGIIGMIDLLLTSSLNRDQRSMTNTIRDSSFSLLNIINDILDFSKI
EAGKLELESLNFSISELLESVIDTITPNADEKRVTLELYTDPNIPHHIQGDPVRIRQVLF
NLVGNAVKFSAVQDSRGEVRITLKKKELSNQLVFLTIEIQDNGIGIEAKQLERLFQPFTQ
AESSTTRQFGGTGLGLAICQNLVNLMGGKIDVSSTVGKGSIFKVNLSFPYIERPSPLTHD
YPKVIVIDDIHSEPLSVRVKEYLSSREVNLVSMPYMNTSDHLRDNVETWAQVVIATDQLE
QSRQQVEQNLTDAERKNIRFLVLKPTSRGDGIIDDNTFSIAASPLKISTLFYGLHVALGR
ESPLDSSAHEADTLSHTPLSITDAEKAGRLILVAEDNQTNQEVIKRQLSKLGYSCIVADD
GVHAEELYPTYKFAMVLTDCHMPRRDGYELTRVLRSMQKKSGIKVPIIAITANALVGESE
KCIAAGMDDYLSKPVELVKLNKMLKKWLSSSFKNSNDADKEQTDTERRYLDQGVISLVFA
DDREDYIAALSDFMEIILPQMKSMVKERNFNISAIGELAHKLKSSAKTIGLLSIGDHCET
IEAIAKEPDNQQARVSITERLDSIEDLLPQIEKEITDVISSACR
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
atgccctttcggcttttaactcaatggctttctctcacatctatcggcagtaaagttatc
ctctctatggctgggatcagtcttctcgtgctcatgctatcggcatcaaatttcatcatg
aatacacgagtgaaagaggatacgactgaggtcagtacacacgagatccccaaagctatc
gcagcaattaatatgctagacgaaataggagatatgaattccaacatcctggagtacgta
ttgggagaagttgatgagagagatgatttcgaccagaaccaaataacgtttttacaatat
cttgccaccttaaaaagtgcccttaaagcacatgaccgccgtatagatgagatcgaagag
ttgtttaacgactttcacacctccgcgagagctaacgtgtttaaccgttataacccaaat
aacgaagcttgggcaaagcaaagagtcgatggacttactaacgttaccggccataaactg
gaagtgctattagattcactcaaggagagtgaaattaaagatgtcggatcacaacccgat
ctcaatgaggtgatccatgatgatctacccggcgtgcgctactacttagaattagtcgat
gaagccggagatatgacggcgaatttaactgagtatatttcaggcatatatgaagccaaa
aacgctttcattgagaacgctcaagattttgaggagtatttgactaaactacaacccctc
gagcaaaaacccgaagagatcgccctcttggccgaggtagaagccctgtataaagtgctt
agagatggcggctttgaagtgtttcaacgctataactcatcgaataagctcgaagcaata
acggctatcgatgagctggaacatcagaccttcgcccgattagagcgtttattagatgat
gtatccatagatgctgagagaaataccaatctggagctattggggttgaggcaaatgacc
atctcaaatcaatatgttcttatcgtctcactatttctggtgctgtctctttgtatcagt
attatctatttctcctaccggatcatcacccgtcccatcactaaactcagtagcacgatg
aaacagcttgccgatggcgataccgaagtcgatgtcgtctatcgggatcgacaagatgaa
gtcggtaatatggcccaggcggtggaagtgtttaaaactaatatgattgcccgcaatgcc
gcagaacaagagctcgtcatggcaaaagataatgcagaggcggcatccaaggcaaaagct
agctttcttgccaccatgtcacatgagatcagaactccgatgaacggcatcataggaatg
atagatctgctgctcacatcgagtctgaaccgagatcagcgcagcatgaccaataccatt
cgcgactcctctttttcactgctcaacattattaacgatattctggacttctctaagata
gaggctgggaaattagaacttgaaagtctcaacttttccattagcgaactactcgaaagt
gtcatcgacacaataacgcccaacgccgatgaaaaaagggtaactctggaactctataca
gaccccaatattcctcatcatatccagggtgatccggtgcgaattagacaggtgttattt
aacttagttggaaatgcggttaagttttcagccgttcaggatagcagaggagaggttcgt
attactctcaaaaaaaaggaattgagcaatcaactcgtcttcttaactattgagatccaa
gataacggcataggcattgaagccaaacaactggagagacttttccagccattcactcag
gccgaatcatctacaacaaggcaattcggcggtacgggactggggctcgccatttgccag
aacctggttaacttgatggggggtaaaattgatgtctccagcactgtgggtaaaggctct
attttcaaggtaaacctatcgtttccatatatagagcggccatcaccattaactcatgat
tatccaaaagttatagtcatcgatgatattcattccgaaccgctatcggtaagagttaag
gagtacctaagttcaagagaggtcaaccttgtctctatgccttatatgaacacctctgat
cacctcagagataatgtagaaacttgggcacaagtcgtcatagccaccgatcagctagaa
caatcccggcaacaagtggagcagaaccttaccgatgcagagcgtaagaacatacgcttt
ctcgtactaaaaccaacatccaggggggatggaataattgatgataataccttctcgatt
gccgcatcacctctaaagataagcactctcttctatggtctacatgttgccctgggtaga
gagagtccgttagactcctccgctcatgaagccgatactctatcacatactcctctgtcg
attaccgatgccgagaaagcgggacgcttaatcctcgtcgccgaagacaatcagactaat
caagaggtgattaagcgccagctgagcaaactcggttactcctgtatcgtggctgacgat
ggagttcatgctgaggagctttacccgacctacaaattcgctatggtattaaccgattgt
catatgcccagaagagatggttacgagctgaccagagtcctccgaagtatgcaaaagaag
agtggcatcaaggtgccgattatcgcgatcacagccaatgccctggtgggcgaatctgag
aagtgcatcgcagcaggaatggatgattacctctctaaacctgtagaactggtcaaactc
aacaagatgctaaaaaaatggctatcctcatctttcaaaaacagcaatgatgcagataaa
gaacagactgacactgaaagacgctacttagaccaaggtgtcattagcttagtctttgcc
gatgacagggaagactatatcgccgcattgtcagattttatggagatcatcctgccacag
atgaagtctatggttaaggagcgcaattttaatattagcgctatcggagaattagcccat
aaactcaaatcgtccgctaaaacgatcggcttactctcaataggcgatcactgtgaaact
atcgaagccatcgctaaagagcctgataatcaacaggccagagtgagcatcaccgaacga
ctcgactcgatagaagatctgctaccccagatagagaaagagatcacagacgtgatctcc
agcgcctgtcgctag
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integrated database retrieval system
