Shewanella sediminis: Ssed_0160
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Entry
Ssed_0160 CDS
T00596
Name
(GenBank) putative Na+-driven multidrug efflux pump
KO
K26937
MATE family, multidrug efflux pump
Organism
sse
Shewanella sediminis
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sse02000
]
Ssed_0160
Transporters [BR:
sse02000
]
Solute carrier family (SLC)
SLC47: Multidrug and Toxin Extrusion (MATE) family
Ssed_0160
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Gene cluster
GFIT
Motif
Pfam:
MatE
Motif
Other DBs
NCBI-ProteinID:
ABV34773
UniProt:
A8FPK0
LinkDB
All DBs
Position
complement(182868..184274)
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AA seq
468 aa
AA seq
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MQANIQDITSDRSIQRTFWRYAIPSIAAMLVSGLYQIIDGMFIGHYLGYQGLAGINVAWP
IIYVIAGVGLMIGMGAGSLISGSRGRSSTSQRGPIEAGNADKGVATILYTAMGLSIGFGA
IFSYLLFLNGTDLLLAQGAEDQALVLAQQYISPFVWTAVITILASALPMLVRNDESPNIA
TALMVTGACMNIVLDYLLIVQFDMGLKGAALATVSAQLSVCVGGFAYFLSTKTQLKLSEY
RPSFHTKLAGKILLLGSSSFVMYIYTSFVFALHNRLFMEYGTSLTVAAFTIVGYLMVLYY
FIAEGIGEGMQPPVSFFLGAAQPHNIKKMVLLAATVSLTIGISWTAILNLFPETMIGLFN
SDDPELIRETITGIHLHLFGMFLDGLVVLAIMYFMAVDQGGKSLAISLGNMLIQLPFLYI
LPKWLGIYGVWIAMPLSNVVMFIIVAPMVWRHMNAATSHKQIASLATA
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgcaagccaacatccaggatataacctcagatcgctcaatacagcgcaccttttggcgt
tacgctatcccttcgatagctgccatgctagtgagcgggttataccagatcatcgacggt
atgtttatcggacactatctgggctatcagggcctggcgggcatcaatgtagcctggccc
atcatctatgtgattgctggtgtgggcttaatgattgggatgggcgctggcagcctcatc
tcaggcagtcgcggaagaagctcgacaagccagcgaggcccaatagaggctggcaatgct
gataaaggagtagcaacaatcctatacacggctatgggtttgtccataggctttggagct
attttttcatacctgctctttctaaacggcaccgaccttctgcttgctcagggcgcagaa
gatcaagccttagtattagcacagcagtatatctctcctttcgtctggaccgcagtgatc
actattcttgcatccgccctgcccatgttggttcgtaacgatgagagtccgaacatagcg
acggctctgatggtcaccggagcatgcatgaatatcgtactagactacctgctcatcgtt
caattcgacatggggctgaagggagccgcgctcgcaaccgtatcagcgcagctgtcagtt
tgtgttggcggcttcgcctattttctttcgactaaaactcaactcaagttgtccgaatat
cgtccaagttttcataccaagctggccggaaagattctgctgctgggatcatcgagtttt
gttatgtatatctacaccagctttgtctttgcgctacataaccgtctgtttatggaatat
ggcacctccttaaccgttgcggcctttaccattgtcggttatctgatggttctctactac
ttcattgcagaaggcattggtgaaggtatgcaacctccggtcagcttctttttaggagcg
gcacagccccataatataaagaaaatggtgctgttggcggcaacggtctcactcaccata
ggcattagctggaccgcgatacttaacctgttccccgaaaccatgattgggttatttaac
agcgacgatccagagctgatacgggaaaccatcaccggcattcacctacatctgtttggt
atgtttctcgatgggttagtggtgttagcaatcatgtattttatggcagtagatcaaggc
gggaaatcgttagccatctctttgggcaatatgcttatccagctgcctttcctctacata
ttacctaaatggctgggaatatatggtgtatggatagcaatgccactctctaatgtggtg
atgtttattatcgttgcccctatggtgtggcgtcacatgaatgcggcaacctcgcataag
cagatagcaagtctggccactgcttaa
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