Shewanella sediminis: Ssed_0167
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Entry
Ssed_0167 CDS
T00596
Name
(GenBank) integral membrane sensor signal transduction histidine kinase
KO
K07638
two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:
2.7.13.3
]
Organism
sse
Shewanella sediminis
Pathway
sse02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Ssed_0167
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sse01001
]
Ssed_0167
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
sse02022
]
Ssed_0167
Enzymes [BR:
sse01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
Ssed_0167
Protein kinases [BR:
sse01001
]
Histidine kinases
OmpR family
Ssed_0167
Two-component system [BR:
sse02022
]
OmpR family
EnvZ-OmpR (osmotic stress response)
Ssed_0167
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
HAMP
HisKA
HATPase_c_2
CovS-like_HAMP
HATPase_c_3
FTCD_C
CsgA
Clusterin
Motif
Other DBs
NCBI-ProteinID:
ABV34780
UniProt:
A8FPK7
LinkDB
All DBs
Position
complement(189301..190611)
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AA seq
436 aa
AA seq
DB search
MKWLKKFLPRSAFSQTVMLIGCLLLINQLVSYLSVATYFIQPTYQQINQLIARQVKLLFV
DGVDIGREHLTMVDALNAKVRDDGMEIYNQKQAREAGIDQAVYYGFLSSQMSEHLGGKAE
VKIAQGDDFEIWIRPPQAPSIWIKVPLTGFNESDLSPLTLYLMVIGALSVAGGWWFARQQ
NRPLKKLQKAAISVSMGDYPEPLPLTGSTEIVEVTNAFNQMSHSMKQLEQDRALLMAGIS
HDLRTPLTRIRLASEMMVEEDEYLKDGIVHDIEDMDAIINQFISYIRQDQESTREQGQLN
DLIEDVVQAESNREAKIEVELNECPEIPMQSIAIKRILSNLVENAFRYGRGWVKLSSHFD
GKRVGFSVEDDGPGIPEDQIPKLFQPFTQGDTARGSVGSGLGLAIIKRITDRHQGEVVLT
NRAEGGLRAQVWLPME
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgaagtggctgaagaagttcctcccccgtagcgcttttagtcagacagtcatgctgatc
ggttgtctgttgctgatcaatcagctggtgtcatacctttctgtggccacctattttatc
cagccaacctatcaacagatcaatcagttgatagcgcgtcaggtcaagttgcttttcgtc
gatggtgtcgatatcggccgtgaacacctcaccatggtcgatgccctgaatgccaaggtg
cgtgacgatggcatggagatctacaatcagaagcaggcacgggaagcgggtatcgatcag
gccgtatattatggcttcttgtcatcacagatgtctgagcacttaggaggaaaagccgaa
gttaagatagctcagggagatgattttgagatctggatccgccctcctcaggctccctct
atctggataaaggttcccttaaccggtttcaacgaatcagacttgtccccactcaccctc
tatctgatggtaattggtgcattgagtgtcgccggcggatggtggtttgccagacaacaa
aacaggcccctcaaaaagcttcaaaaagcggcaatatcggtctcgatgggcgactatccc
gagccattgcctctcacaggctccaccgaaatagtcgaagtgaccaacgcctttaatcag
atgtcccatagcatgaaacagctcgaacaggacagggccctgttgatggcggggatatcc
catgatcttcgcacgccactgacccgcatccgtctggcctctgagatgatggttgaagaa
gatgagtacctcaaagacggcatagtgcacgatatcgaagatatggatgccatcatcaat
cagtttatttcctatatccgccaagatcaggaaagcacccgggaacagggacagcttaac
gatttgatagaggatgtggtgcaggccgaatcgaaccgagaggcaaagattgaagtcgaa
ctcaatgaatgccccgagatccccatgcagagcatcgccatcaagcgcatactcagtaac
ctggtcgaaaatgcctttcgatatggtagaggctgggtaaaactgagctctcatttcgat
ggcaaacgggtgggtttcagtgtcgaagacgatggccccggcattccggaagatcaaatc
cccaaactgtttcaaccttttactcagggagatacggcgaggggcagcgtgggctcgggt
ctggggcttgccatcatcaaacgaattaccgatcgccatcagggggaagtcgtactcacc
aatcgagccgaagggggtttacgcgctcaggtttggttacctatggagtag
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