Shewanella sediminis: Ssed_0210
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Entry
Ssed_0210 CDS
T00596
Name
(GenBank) heavy metal efflux pump, CzcA family
KO
K07787
copper/silver efflux system protein
Organism
sse
Shewanella sediminis
Pathway
sse02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Ssed_0210
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sse02000
]
Ssed_0210
Transporters [BR:
sse02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
Ssed_0210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
ABC_membrane
Motif
Other DBs
NCBI-ProteinID:
ABV34823
UniProt:
A8FPQ0
LinkDB
All DBs
Position
complement(239331..242468)
Genome browser
AA seq
1045 aa
AA seq
DB search
MLKKIIEASIKQRLMVLIITIMITVWGVQELRNTPLDALPDLSDVQVIIKTPFPGQAPKL
VEEQVTYPLSTAMLAVPGAKTVRGYSFFGDSYVYVIFEDGTDIYWARSRVLEYLNQVSSR
LPQGIQPSLGPDASGVGWIFEYALVDRSGNLDLSQLKSLQDWYLKLELQSVAGVSEVATV
GGMEQTYQIVIEPDKLAIYKLDIASIKNAIAKSNTEAGGSVIEMAEAEYMVRAKGYRQTL
DDFREIPLGITSPSGTPLLLKDVATIRKGPASRRGIAELDGEGEVVGGIIIMRYGENALA
TIEAVKDKLEQLKAGLPEGVEIIPTYDRSQLIESSVENLLHKVVEEMFVVGLVCLLFLLH
ARSTLVAVITLPLAILIAFIVMNKMGVNANIMSLGGIAIAIGAVVDGAIVMIENMHKHLE
HFKEKYQRPPNNKEHWKIVTEASIEVGPALFFSLLIITLSFVPVFALEAQEGRLFSPLAY
TKTFAMAAAALLSITLVPILMGFFIRGKIPKETSNPISRVLIAIYKPSLTLVLRFPKITL
VIAVITLLSAWYPLNNLGSEFMPELEEGDLLYMPTALPGISASKAAEILQQTDRLIKTVP
EVKRVFGKVGRAETATDPAPLTMLETTIMLNPRDEWREGVALQDIIDQLQQTVKVPGLTN
AWVQPIKTRIDMLSTGIKTPVGIKITGADVDELQKIGTNIEAILSKLPNTKSAYAERVGG
GRYIDITPKLDVASRYDMTLTDIQDVVRYAIGGMEIGESVQGAERYPINLRYPRELRDNI
EKLRELPVITKTGHYLPLRNLADIEITDGAPMLKSENGRLISWVFVDIEGTSIGEYIDEA
KQALDNVLTIPPRYSYGFAGQYEYMQRVDAKLKKVIPMALGVIFILLMMTFGSTLQAGII
MLSLPFALVGSTWLLYALEYNMSVAVAVGMIALAGVAAEFGVVMLVYLNNAIKHRKETGG
YESVTDLKEALIEGAVMRIRPKAMTVATIFFGLLPIMWGSGAGNDVMQKIAAPMIGGMVT
APLLSLFVLPALYLIIYGRKLNSTQ
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atgcttaagaaaattatcgaggcctcaatcaagcaacgcctcatggtattgatcatcacc
atcatgatcacggtatggggcgttcaagagctgagaaataccccgttagatgcccttccg
gatctttccgatgtgcaggtgatcattaaaaccccattccccggacaggcaccaaaactt
gtcgaggagcaggtgacttacccgttatccacggccatgctcgctgtacccggcgccaag
acagttcgaggctactctttcttcggtgactcctatgtgtatgtcatttttgaagatggt
accgatatctattgggcaagatcccgggttctggaatacctcaatcaggtcagcagccgc
ttacctcaaggtatccaaccctctctgggaccggatgcttccggagttggctggatattc
gagtacgccttagtggacagatccggtaatttagatctgtctcaactgaaaagcctacaa
gattggtatctgaaactggagctccaaagtgtcgctggagtctccgaagtcgccaccgtc
ggcggtatggagcagacctatcagatagtgatcgaacccgataagttggccatctataag
ttggatatcgcctcgattaagaatgcgatagctaagtcgaataccgaagccggtggttcg
gttatcgagatggccgaagccgaatacatggtgcgagccaaaggctatcgacagacatta
gatgatttcagagagatccctctgggaataacgagcccctccggtacccctctgctgctt
aaagatgtggctaccattcgaaaaggccccgcgtctcgccgaggtattgccgagctcgac
ggtgaaggagaggtggtcggtggcattatcatcatgcgttatggcgagaatgcattagcc
acaatcgaagcggtaaaagataagctggaacagcttaaggccggtctcccggaaggggtt
gagatcatcccaacctacgacagatctcaactgatcgaaagttcggtcgaaaatctactc
cataaggtcgtagaggagatgtttgtggtcggtctggtgtgtctgcttttcttgctgcat
gctcgctcgacactcgttgccgtgatcaccttgcctttggctattctcatcgcctttatc
gtgatgaacaagatgggggtgaatgccaatattatgagcctcggcggcattgcaattgct
atcggggcggtggtcgatggcgccatcgtcatgatcgagaatatgcataaacatctcgag
cattttaaagagaaatatcaacggccacctaacaataaggagcactggaagatagtcaca
gaggcgtccatcgaggtcggtcctgcgctgttcttttcactgctgattattacgttaagc
ttcgtgcccgtctttgcactcgaagcccaagagggtcggttattcagccccttagcctat
accaagacctttgcgatggctgcggcggccctgctttcgataaccttagtgcccattctg
atgggtttcttcattcgaggtaagatccccaaggagaccagtaatccaatcagtcgggtg
ttgatcgcaatttacaagccctcactgacactggtgttaagatttcctaagatcacactc
gttatcgccgtcattaccctactcagcgcctggtatcctctgaataacttaggcagtgaa
tttatgcctgagcttgaagagggcgatctactctatatgcctaccgctctgccggggatc
agtgccagtaaggccgcggagatattgcaacaaaccgatcgactgattaaaaccgtgcct
gaggtcaagcgggtatttggtaaagtcggcagggccgaaacggccaccgatcctgcacca
ttaactatgcttgaaaccaccatcatgttgaatccaagagatgagtggagagaaggcgtc
gcgcttcaagatattatcgaccaactgcagcagacggtaaaagttcccggcctgactaac
gcctgggttcaacccatcaaaacccgcatagatatgctctctaccggtatcaagacgccg
gtaggcattaagataacgggggccgatgtcgatgaactgcagaaaattggtaccaatatc
gaagccatcctcagcaagctgccgaatactaaatcagcctatgccgaacgcgtcggtggt
ggccgatacatagatattacgcctaaactcgatgttgcttcccgctacgacatgaccctc
accgacatacaggatgtggttcgttacgccatcggcggtatggagataggtgaatcggta
cagggcgcggagcgatatccaattaaccttcgctaccccagagagctcagggataatatc
gagaaactcagggagcttcccgtgatcaccaaaacgggtcattacctgccgctgcgtaac
ttagccgatatcgagatcaccgatggggcacctatgctcaagagtgaaaatggtcgcctg
atatcctgggtgtttgtcgatattgagggcacctcaattggcgaatatatcgatgaggca
aagcaggcactggataacgtgctcactatacctcccagatatagctatggtttcgcaggt
cagtatgagtatatgcaacgcgtcgatgccaaactgaagaaagtgatacctatggcactc
ggggttatcttcattctgcttatgatgaccttcggctcgacactacaggcggggattatc
atgctcagcctgccgtttgccttggttggtagcacctggttactctatgccttggaatac
aacatgtcagttgccgtcgccgtcggtatgatcgcactggcgggggttgcagccgaattc
ggagtggtgatgttggtctacctgaataacgccatcaagcatagaaaggagaccggcggc
tatgaatctgtcacggatctcaaggaagccttaatcgaaggcgcagttatgcgtattcgc
cctaaggccatgacagtcgcgaccatcttcttcggactcctacccatcatgtggggatcg
ggagcgggcaatgatgtgatgcagaagattgccgcacctatgataggaggaatggtcaca
gcgcccttgttatctcttttcgtgttgccggcactctacctgatcatctatggcagaaag
ttaaactcgacgcagtaa
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