Shewanella sediminis: Ssed_0250
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Entry
Ssed_0250 CDS
T00596
Name
(GenBank) Sel1 domain protein repeat-containing protein
KO
K07126
uncharacterized protein
Organism
sse
Shewanella sediminis
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99997 Function unknown
Ssed_0250
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Ortholog
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GFIT
Motif
Pfam:
Sel1
DUF4145
TPR_27
ARM_TT21_N
TPR_2
TPR_1
Motif
Other DBs
NCBI-ProteinID:
ABV34863
UniProt:
A8FPU0
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Position
282807..284225
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AA seq
472 aa
AA seq
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MLTDVEFVTQFSTELGHDYGVAKSYVRDVPTQALLQIRSFTHKLTELLAKPKRITFDSPN
LYDRIEMLNRKRVINVRTTRALHKLRGDGNRGAHPEKYHLTSEQLLELSEKSIEKLLSLV
ASLFTQVTTNPLPEYRFEAFDSFAGRDLCYRAVMESDPQAQYLVGMSLKTKALMQREQEQ
ALAEPEEEQGSPPDKFSDSTFKKAEYWFTQAADSNMDALYESGVALIHGYSGKVDIAAGE
QVIAAAAEANVANAMALLGYFHLVGGESIKLDSDKALHYLQLAADLEQSEAIANLGVLFY
QRGDLEKAKHFIAKAAQAGFPHAQYHLALMLARGEGCDADSIAGEQWMAEAAEQGQVDAM
LARAQSMLNDDNAFGCDLSQAELYLREAIKYGHSVPAMIELSIALADGMLGKIDVVGSAA
LLKLARERSNPQELAVIEPLWESLSLQVENVLSMTDNTDEVASLQRAKELLS
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
gtgcttactgatgtcgaattcgttactcagttttctactgagctgggccatgattacggg
gtagccaaaagctatgtccgggatgtccccacccaagccttgcttcaaatccgcagcttt
actcataagctgaccgagctgctggctaagcctaaacgaataaccttcgatagccccaac
ctatacgacaggatcgaaatgcttaaccggaagcgagtgatcaacgtgcgtaccaccaga
gctttgcacaaattgcgaggtgacggtaaccgcggggcacatccggaaaagtatcacctg
acttctgagcagttactcgagttaagtgaaaagtcgatagagaaactgctgagcctggtc
gcgtctctgtttactcaagttaccaccaacccccttcccgaatatcgcttcgaagcgttc
gactcttttgccgggcgggatctctgttatcgagccgtgatggagtcagaccctcaggcg
caatacttagtcggcatgtcgcttaagactaaagccttgatgcagcgagagcaggagcag
gcgttagccgagccggaggaagaacaaggatcccccccggataagttttctgacagtaca
ttcaaaaaagccgagtattggtttactcaagccgccgatagcaatatggatgcgctctat
gaatcgggcgtggcccttattcatggttatagcggtaaggtcgatattgcagccggtgaa
caagtcattgcggccgcagctgaggcgaatgtggctaatgccatggcgctactcggctat
tttcatctggtaggcggtgagagcattaaacttgattcggataaggccctgcattatctt
cagctggctgcagatcttgaacaatcagaagcaatagccaatttaggggtcctgttttat
cagcgcggcgatcttgaaaaggcgaagcattttatcgctaaagcggctcaggcaggcttt
ccccatgctcagtatcatctggcgttaatgttggctcgaggcgagggttgcgatgccgat
tcgattgccggtgagcagtggatggccgaggcggcggagcagggacaggtagatgctatg
ttggcccgcgcacaatctatgttgaatgacgataatgctttcggttgcgacctctcacag
gccgagctgtacttacgggaggcgattaaatatggccacagtgtacccgctatgattgaa
ctgagtatcgcgcttgccgatggtatgttgggaaaaattgatgtcgtgggatctgcggcc
ctgctaaaactggctcgtgagcggagtaatccccaagagctggccgtgatagaacccttg
tgggagtcactgtccctgcaggttgaaaacgtgttgtcgatgactgataacaccgatgaa
gtcgcctctcttcagcgggcaaaagagctgctctcttaa
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