KEGG   Shewanella sediminis: Ssed_0299
Entry
Ssed_0299         CDS       T00596                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator, fis family
  KO
K07713  two-component system, NtrC family, response regulator HydG
Organism
sse  Shewanella sediminis
Pathway
sse02020  Two-component system
Brite
KEGG Orthology (KO) [BR:sse00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    Ssed_0299
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:sse02022]
    Ssed_0299
Two-component system [BR:sse02022]
 NtrC family
  HydH-HydG (metal tolerance)
   Ssed_0299
SSDB
Motif
Pfam: Sigma54_activat XylR_N Sigma54_activ_2 HTH_8 V4R AAA_16 AAA_5 AAA_2 AAA_19 bpMoxR RsgA_GTPase Mg_chelatase HTH_7
Other DBs
NCBI-ProteinID: ABV34912
UniProt: A8FPY9
LinkDB
Position
353807..355450
AA seq 547 aa
MLINDIDPKDFLEFVPEEGIIKLKDQRMLLFDAVALGLLRKELIDTFGHFAARSILTRFG
YAHGWRTAELLRSEYPTIFSQDEGGSYLHMLFGLTRTCDFNHSDNLASGFSMQVCWDNSY
EAEQHHLLFGVAEEPICWTLTGFASGYESCKQEREVYFIEDKCRGAGDPFCRIVGKFRED
WGDELEAHQPFYSMESADTLLKGLTQKLKRTELDLKRQQEQLSLYNANLHNISGLVTRSN
EMKRIVELARRIAKVDSSVVVSGESGVGKERVSRFIHDHSSRASGPFVAVNCGALTETLL
ESELFGHKKGAFTGADRDHIGLFEQANEGTLFLDEIGDISAAMQVKLLRALQEKEIRRVG
DSQDRKVNVRIIAATHRNLSEEVKANRFRADLYYRLCVIELTIPPLRDRAEDILFIAKVI
LEQVNKDMNRNVIGFSPKASELLLSYGWPGNVRELQNVVERSVALCMGQEITPGDFPETM
TQNPVLKSQLSTPTLSLEEMEMEYILSVLKSCGGNKTLAMEKLKIGKTTLYRKLNDYRKL
SEELVTA
NT seq 1644 nt   +upstreamnt  +downstreamnt
atgctgataaacgacatagatccgaaagattttctggagtttgttcccgaagaggggatc
attaagctcaaagatcaacgcatgttactgttcgatgccgtagccttgggtttactgcgt
aaggagctgatagataccttcggccattttgccgcgcgtagtatattgactcggtttggt
tatgctcatggctggcgtacggcggaattattgcggtcagaatatccgaccatattttct
caagatgagggtggctcctaccttcacatgttgtttgggttgaccagaacatgcgacttc
aaccattcggacaatttggcctcaggcttttcgatgcaggtgtgttgggataactcctat
gaagcggagcaacatcatctgctcttcggggttgccgaggaacccatctgctggacgctg
acagggtttgccagtggttatgaatcctgtaagcaggagcgtgaagtctactttatcgaa
gacaagtgccgcggggccggcgatccgttttgtcgtatcgtggggaagttcagagaagat
tggggagatgaactcgaggctcaccagccattttatagcatggagtcagccgataccctg
ctcaaagggctgactcaaaagttaaagagaaccgagctggatctcaagcgtcagcaggag
cagttgagcctctataatgccaaccttcataacatttccggcttagtgacccgcagtaat
gagatgaaacggattgtcgagttggcccggcgtattgccaaggtggactcgtccgtcgtg
gtctcgggagagagcggtgtcggtaaagaacgtgtctcccggtttattcatgaccattca
tcgcgcgcctcaggacccttcgtcgccgttaattgcggagctctgactgaaacactgctg
gagagtgaactattcggtcataagaagggcgcctttaccggcgccgacagagatcatatc
ggcttatttgagcaagccaacgaaggtacgctgtttctcgatgagatcggtgatatatcg
gcggcgatgcaggttaagttacttagggcactgcaggagaaagagataaggcgggtcggg
gatagtcaggacagaaaggtcaatgtacgtatcattgcggccactcatcgaaatttgagc
gaagaggtgaaagccaatcgtttccgggccgacctctattacaggctctgtgtgattgag
ctgaccattccccctctgcgggacagggcggaagatattctgtttattgctaaggttatt
ctggagcaggtgaataaggatatgaatcgtaatgtcatcggcttctctccgaaggcctcc
gagctgcttctgagctacggttggcccggcaatgtgcgtgagttacagaatgtggttgag
cgaagtgttgccctgtgtatgggccaggagatcactccaggcgactttcccgagaccatg
acccaaaacccggtattaaagtctcagctttcaacgccgaccctgtcgttggaggagatg
gagatggaatatattctatctgtgcttaagtcgtgtggcggaaataaaacccttgccatg
gagaagcttaaaatcggcaagacgaccctatatcgaaagctcaatgattatcgaaagctg
tcagaggagctggtgacagcttga

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