Shewanella sediminis: Ssed_0406
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Entry
Ssed_0406 CDS
T00596
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase
KO
K01929
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:
6.3.2.10
]
Organism
sse
Shewanella sediminis
Pathway
sse00300
Lysine biosynthesis
sse00550
Peptidoglycan biosynthesis
sse01100
Metabolic pathways
sse01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Ssed_0406
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Ssed_0406
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Ssed_0406
Enzymes [BR:
sse01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
Ssed_0406
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Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
ABV35019
UniProt:
A8FQ96
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Position
474389..475756
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AA seq
455 aa
AA seq
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MIPLTLLQLSHRLDARLIGPDTEIAYVCSDSRSIPPQTLFVALKGERFDGHDFAHLAVEN
GANALLVTHELPLDLPQLIVKDTQKAMGEIGAYLREVIQPKSIALTGSNGKTSVKEMVAT
ILSQRHKVLYTAGNFNNEIGVPLTLLRLEEGDEFGVFELGANHRGEIDYTSSLVKPDVAL
VNNVASAHLEGFGSLAGVAAAKSEIFNHLSPDGTAVINADDSFARVMKEAASEHKQLTFA
IEAAADLQGSGLEPDLLGRYCFKMSYLNQEVSVTLPLSGRHQVSNALAAAGICLTLGLPL
SEIVSGLSLLEPVKGRMLPTQLGRVRVIDDSYNANPASVSAAIDWLQEIDGYRCLVLGDL
GELGDNASLLHTELGELAKIRGIEALFSLGELSANASTAFGGVHHQELEQVVNNLVNHIN
QLQGDVTVLVKGSRSAKMERVVEALIVAYGRGEFV
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgatcccgttaacgttattgcaattgagccatcgattagatgcgcgcctcatcggtcct
gataccgaaattgcctatgtttgcagtgatagtagaagcattccgccccagactttgttt
gttgcactgaaaggcgagagattcgacggccatgacttcgctcatttagcggtcgaaaat
ggcgctaatgcgcttctggtgacccatgaattacctctggatctcccccaactgatagtg
aaagacactcagaaagccatgggagagataggggcatacctgcgagaagtcattcagcct
aagtcgatagcgctaaccggttcaaatggaaaaacaagtgtgaaagagatggtcgcgacc
atcctctcccagagacataaggtgctctacactgccggcaattttaataatgaaattggt
gtcccccttaccctgcttcgtttggaggagggagatgagtttggtgtgttcgaacttggg
gcgaatcatcgcggcgagatcgactacacctcgtcactggttaagcctgatgttgcttta
gtcaacaatgttgcctcggctcacctcgaaggctttggttcattagccggggtcgcagct
gccaagtctgagatatttaatcatctgagccctgacgggacggcagtgattaatgccgat
gattcattcgctcgggtgatgaaagaggcggcaagtgaacataagcagctaacttttgct
atcgaagctgcagccgatcttcaaggaagcgggctcgaacccgatctgctgggtcgctat
tgcttcaagatgagttacctgaaccaagaagtttcggtgacattgcccttgtctggtcgc
catcaagtgagcaatgctctggcagccgcagggatctgtttaaccttgggcctgcctctg
agtgagatcgtttcaggcttgtctttgctcgagccggtgaaaggtagaatgttaccaact
cagctcggtcgggtgcgagtgattgacgatagttataacgcaaatcctgcatcggttagc
gctgcaattgactggcttcaagaaattgatggatatcgctgtttagtgctgggtgatttg
ggagaattaggcgacaatgcgtcccttttgcatactgagctgggtgagcttgcaaaaata
agagggatagaagcactgttctcattgggtgaactaagcgcaaatgccagtaccgccttt
ggtggtgttcatcatcaagagttagaacaagtagtaaataatttagttaatcatattaat
cagttgcaaggtgatgtgacggttttagtcaagggctcacgcagtgccaaaatggaacgc
gtggttgaggccttaatagttgcctatgggcgcggggagtttgtttaa
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