Shewanella sediminis: Ssed_0408
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Entry
Ssed_0408 CDS
T00596
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
sse
Shewanella sediminis
Pathway
sse00470
D-Amino acid metabolism
sse00550
Peptidoglycan biosynthesis
sse01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Ssed_0408
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Ssed_0408
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sse01011
]
Ssed_0408
Enzymes [BR:
sse01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
Ssed_0408
Peptidoglycan biosynthesis and degradation proteins [BR:
sse01011
]
Precursor biosynthesis
Amino acid ligase
Ssed_0408
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Gene cluster
GFIT
Motif
Pfam:
MurD-like_N
Mur_ligase_M
Mur_ligase_C
XdhC_C
2-Hacid_dh_C
Motif
Other DBs
NCBI-ProteinID:
ABV35021
UniProt:
A8FQ98
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All DBs
Position
476911..478242
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AA seq
443 aa
AA seq
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MVNHKSHLILGLGATGLSVVRYLHGLGITPLVMDSRQQPPGADKLAAEFPDVELISGGFD
CRYLVQATQIIVSPGIAIDTPEIRAAIDMDIEVIGDVELFARAVKERDACVIGITGSNGK
STVTTLVAEMAKAAGINYAVGGNIGIPVLDLLQSDIELYVLELSSFQLETTHSLNCISAT
CLNISEDHMDRYSDIEAYRQAKLRLYSQTRFALFNREDELTKPKDPMNQNSFGLSLPDND
EWGVCEGKIVHGSVEVISLQDVALVGSHNHANLIAAMALAYQAGIEKAAMVEVASSFTGL
EHRFEMVVNRNGVAYINDSKATNVGATVAAIEGISEHLGDIILIAGGDGKGADFKPLVPV
LKAVSHLITLGKDGDKIAALSDSSIRVDSMADAVNKAAQLAIAGDIVLLSPACASLDMYK
NFMERGDDFRRLAEGLSAEALNA
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggttaaccacaagtcgcacctgatattgggattgggagccacaggcctctcggttgtg
cgttatctacatggcctggggatcactcccttggttatggatagtcgtcagcaacctcct
ggtgcggataagttggcggcagagtttcccgatgtcgagttgatcagtggcggcttcgac
tgtcgatatctggtgcaggcgactcagatcattgtcagtccgggcatcgctatcgataca
ccggaaatccgagccgcgatagatatggatattgaggttatcggcgatgtcgagctattt
gccagagcggtcaaagagcgggatgcttgcgttatcggtatcactggatcgaatggaaaa
tctacagtaacgaccttagtggctgagatggctaaggctgcgggtatcaattatgccgtt
ggtggcaatattggtattcctgttttagatctactccagagcgatattgagctgtatgta
ttggagctgtcgagttttcaattagaaacaactcacagcttgaattgtatttcggctact
tgccttaatatcagtgaagatcatatggatagatatagtgatatcgaagcatatcgtcag
gctaagttgaggttatattcacaaacccggttcgctctgtttaatcgagaagatgagctg
actaaacccaaagatccgatgaaccagaacagttttggtttatctctgcccgacaatgat
gagtggggagtctgcgagggcaagatagtacacggtagtgtagaggttatcagtcttcag
gatgttgctctggtcggcagccataatcatgccaatttgattgccgctatggcgcttgct
tatcaagccggtatagaaaaggctgcaatggttgaggtcgcttcatcgtttaccgggctc
gagcataggtttgagatggtcgttaaccgaaacggtgttgcttacattaacgactctaag
gcgacaaatgtcggtgctactgtggcggctatcgaggggatcagtgaacacctgggtgat
atcattttaattgccggtggtgatggaaaaggagcggatttcaaacctttggtgccagtg
ttaaaggcggtgagccatctcattacattaggtaaagatggagataagatcgccgccctg
tccgacagctcgattagggttgattctatggctgatgcggtcaataaagccgcacagtta
gccatagctggtgatattgttttgttgtctccggcgtgtgccagtttggatatgtacaag
aattttatggaaagaggcgatgattttcgccggttagccgaagggttaagcgccgaggca
ttaaatgcgtag
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