Shewanella sediminis: Ssed_0411
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Entry
Ssed_0411 CDS
T00596
Name
(GenBank) UDP-N-acetylmuramate--alanine ligase
KO
K01924
UDP-N-acetylmuramate--alanine ligase [EC:
6.3.2.8
]
Organism
sse
Shewanella sediminis
Pathway
sse00550
Peptidoglycan biosynthesis
sse01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Ssed_0411
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sse01011
]
Ssed_0411
Enzymes [BR:
sse01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.8 UDP-N-acetylmuramate---L-alanine ligase
Ssed_0411
Peptidoglycan biosynthesis and degradation proteins [BR:
sse01011
]
Precursor biosynthesis
Amino acid ligase
Ssed_0411
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase
Mur_ligase_M
Mur_ligase_C
MurD-like_N
F420_oxidored
BRCT
Motif
Other DBs
NCBI-ProteinID:
ABV35024
UniProt:
A8FQA1
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Position
480547..482016
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AA seq
489 aa
AA seq
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MSKNQEKYSQLRSIIPEMRRVKHIYFVGIGGAGMGGIAEVLVNEGYKLSGSDIAENAVTQ
RLASLGAKIHIGHREEQVHGADVVVVSTAISADNPELLEAQALRIPVVQRAEMLAELMRY
RHGVAVAGTHGKTTTTSLIASVYGQAERDPTFVIGGLLNSAGTNARLGHSRYLIAEADES
DASFLHLQPMVSVVTNIEADHMDTYEGDFEKLKSTFIDFLHNLPFYGVAVMCIDDPVVRE
LLPKVGRKIVTYGFSEDADVQALNFVQEAYLSRFTLRRAGVEDMEVVVNLPGQHNVLNAL
AAIAVATEDEIDDAAIIQALADFQGIGRRFEQLGCFDTNKGEMVLVDDYGHHPSEVAATI
KAAKAGWPEKRLVMVYQPHRYSRTRDLYDDFVEVLSQVDCLLLLDVYAAGESPVPGADSR
ALCRSIRQRGQLDPIFVSDSEQLLSLLPDVLQAGDLVLTQGAGNIGAIAKQLSLSSLGFD
LAASGTGKE
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgagtaagaatcaagagaagtattcacagttaagaagcatcatcccggagatgagaaga
gttaagcatatctacttcgtcgggatcggtggtgcgggtatgggaggaattgctgaggta
ctcgttaacgaggggtacaagttatccggttccgatatcgctgagaatgctgtgacacaa
agacttgcctctctgggcgcaaagatccatataggccatcgagaagagcaggtgcatggc
gcggatgttgtcgttgtatcgacggcgattagtgcggataaccctgagcttctcgaggcg
caggcgctgaggatcccggtggtccagcgggcagagatgcttgccgagttaatgcgttac
cgtcatggtgtcgccgttgcgggaacccatggtaaaaccactacgaccagtttaattgcc
agtgtttatggtcaagctgagcgcgatcctaccttcgtcattggtggcctgctaaacagt
gccggtaccaacgccagattgggacacagtcgatacctcattgccgaggcggatgagagt
gatgccagcttcttgcatctgcagccaatggttagcgttgtgaccaacattgaagcggat
catatggatacctatgagggagattttgaaaaattaaaatctacctttatcgacttcctg
cataacctgcctttttatggcgtcgcagtaatgtgtatcgacgacccggttgtgcgcgag
ttactgcccaaggtaggtcgtaagatagtgacctatggtttcagtgaagatgcagacgtt
caagcgctcaacttcgtacaggaagcgtatcttagccgctttactctgagaagggccggg
gttgaagatatggaggtcgtggtgaacttacccggccaacataatgtgctcaatgcattg
gccgcgattgcagttgctacagaagatgaaattgatgatgcggcaattattcaagccctc
gctgacttccagggtatcggccgtcgattcgagcagttaggttgtttcgataccaataag
ggggagatggtgttggttgatgattatggtcatcatcccagcgaggttgctgcaacgatt
aaagccgctaaagccggttggccggaaaaacgtctggtcatggtctatcaacctcacaga
tatagccgtacacgggacctttacgatgactttgtcgaagtcctgtctcaagtggattgt
ctgttgttactggatgtctacgcagcgggagagtctccggtaccgggggccgatagccgc
gcgttatgccggtccatacgtcaacgaggccagctcgaccccatttttgtctccgatagt
gaacaactgctcagtttactgccggatgttctccaagcgggagatcttgtattgactcag
ggagctggaaatatcggggcgatagctaaacagttatctctatcgagccttggtttcgat
ttagcggcttcaggaacgggtaaggaataa
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