Shewanella sediminis: Ssed_0425
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Entry
Ssed_0425 CDS
T00596
Name
(GenBank) type IV-A pilus assembly ATPase PilB
KO
K02652
type IV pilus assembly protein PilB
Organism
sse
Shewanella sediminis
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
sse02044
]
Ssed_0425
02035 Bacterial motility proteins [BR:
sse02035
]
Ssed_0425
Secretion system [BR:
sse02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
Ssed_0425
Bacterial motility proteins [BR:
sse02035
]
Pilus system
Pilus assembly proteins
Ssed_0425
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSE
MshEN
AAA_30
AAA_22
AAA_16
AAA_14
AAA_11
AAA_29
AAA_7
DEAD
Motif
Other DBs
NCBI-ProteinID:
ABV35038
UniProt:
A8FQB5
LinkDB
All DBs
Position
complement(516774..518483)
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AA seq
569 aa
AA seq
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MPTTGLHLGLSTLFIRKQLLSEEQIASAIAKSRQSKRPLVSTIISEKLISGREIAELCYE
EYGTPLLDLDEFDIASIPENFLNKKLIEKHKCLPLFKRGNRLYIGTSDPTNIAALEDFQF
SAGLHAEAILVEDDKLTKALEKVLEEDISALDIGDIDEDSLAGIEIEDTSKRDDDQNGDS
SDDAPIVIYINKILTDAIRKGASDLHFEPYEKRYRIRFRIDGILHEVSEPPVNLSNRISA
RLKVMSKLDIAERRVPQDGRIKMKLSRTKSIDFRVSTLPTIWGEKIVMRILDSSSAQLGI
EKLGYEDDQRELYEEMLAKPQGMILVTGPTGSGKTVSLYTGLNILNTEERNISTAEDPVE
INLEGVNQVHINLKAGLTFASALRSFLRQDPDVVMVGEIRDLETAEIAIKAAQTGHLVLS
TLHTNSAAETLTRLINMGVPGYNIASSVNLIIAQRLARRLCPECKQPEEVPKHELEKLGF
NPTHIEAGITVYKPIGCDLCSGGYKGRVGIYEVMRMSDEIARTIMEGGNSLQIANQAKEQ
GMRDLRGSGLLKVIQGVTSIAEINRVTSF
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
gtgccaacgactgggttacacttaggattatcaacccttttcattcgcaaacaactgctc
agcgaagagcagatagcatcggcgatagccaaatctcgtcaatcgaagcgacctctagtt
tcaaccataatctcagaaaagcttatctcagggcgagaaattgccgagttatgctatgaa
gagtacggtactccactgctggatctcgatgaatttgatattgccagtatcccggaaaac
tttctcaacaaaaagctaattgaaaaacacaagtgcctgccactttttaagcgtggcaac
cgcctctatattggcacctcagatccgaccaatatcgcagcactggaggattttcaattt
agcgcaggcctgcacgccgaagccattttggttgaagacgacaagttaaccaaggctctg
gaaaaggtactcgaagaggacatttcggccctcgatatcggcgacatagatgaagactct
ttagctggcatagagatagaggacaccagtaaacgcgatgacgatcagaatggtgacagc
tccgatgatgccccgatcgttatctatatcaataaaattttgaccgatgcgatacgaaaa
ggcgcatcggatcttcatttcgagccctatgagaaacgatatcgaattcgctttcgcatc
gatggcatcttacacgaagtatcagagcctccggtaaatctctctaaccgtatttcggct
cgcctcaaggtgatgtcaaagctggatatcgccgagcgccgcgtcccccaagatggccgc
ataaagatgaagctatctcgcaccaaatcaatcgattttcgtgtcagtacgctgccaaca
atttggggggagaagatcgtaatgcgtatcctggactcatcctctgctcaactaggcatc
gagaagctgggttacgaggatgatcagcgagagctttacgaggagatgctggcaaaacca
caaggcatgatcttagtgactggcccaacgggttcgggtaagacggtatctctctacacc
ggactcaacatccttaacaccgaagagcgtaatatctcaacggcagaggatccggtagag
ataaacttagaaggtgtcaatcaggtacatatcaatctaaaagccggactcaccttcgca
tcggccctgcgttcgttcctccgtcaagatcccgatgtcgtcatggtgggtgagatccga
gacttagagacagccgaaatagccattaaggcggcacaaaccggtcacttagtgctctcg
acactgcatactaactcggcggcagagactctcactcgtctcattaatatgggcgtgccc
gggtacaatattgccagctcggtcaacctgattatcgcccaacgtctggctcgtcgttta
tgtccagagtgtaaacaacctgaagaggtgcccaaacacgaattggaaaaactggggttt
aatccaactcatatcgaagctggcatcacagtctataagccaataggctgcgatctctgc
tcaggtggttataaaggccgtgtcggtatctatgaagtgatgagaatgtcagatgagata
gcccgtactattatggagggaggtaactccttacaaatagccaaccaggcaaaagagcag
gggatgagagatctcaggggttccgggttattaaaagtcattcaaggtgttaccagcatt
gcagagataaatcgtgtaaccagtttttaa
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