Shewanella sediminis: Ssed_0430
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Entry
Ssed_0430 CDS
T00596
Name
(GenBank) regulatory protein GntR, HTH
KO
K05799
GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
Organism
sse
Shewanella sediminis
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sse03000
]
Ssed_0430
Transcription factors [BR:
sse03000
]
Prokaryotic type
Helix-turn-helix
GntR family
Ssed_0430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GntR
FCD
MarR_2
HTH_41
HTH_DeoR
MarR
HTH_11
TrmB
Fe_dep_repress
HTH_36
Motif
Other DBs
NCBI-ProteinID:
ABV35043
UniProt:
A8FQC0
LinkDB
All DBs
Position
522956..523708
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AA seq
250 aa
AA seq
DB search
MAYSKINQPKISDVIMGQLEQMILEGSLQPGQKLPPERELALQFEVSRPSLREAIQKLEA
KGLLLRRQGGGTYVKEQLWQSLADPIVELMHSDSESQYDLLEFRHATEGMMAYFAALRGT
DADMQNIKRTIMEVDAASEIEQQAEAIVKFYRAVAEASHNVAMLHLVLSLAPVLHKNVAQ
NLELLNRREEASKMANDHRLALLAAIVRRDPEAAREASNEHLSYIEEVMLSVREEDSRLQ
RSLRRLKSGV
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atggcttatagcaaaataaaccagccaaaaatttctgacgtcatcatgggacagttagaa
cagatgatcctggaaggaagtctccagcctggtcagaaactaccccctgaacgcgaactt
gcactgcagttcgaagtttcccgtccctcattacgagaagccattcaaaagcttgaagcc
aaaggtctactcttgcgtcgtcaaggtggtggcacctatgtcaaagagcagctttggcag
agcctggcagatcctatcgtcgagttgatgcatagtgactccgagagtcagtatgatcta
ctcgagtttcgtcatgctaccgaaggcatgatggcatattttgcggcgctacgtggtacc
gacgccgatatgcagaatatcaagcgcacgattatggaagttgatgctgcatctgaaatt
gagcagcaagcggaagctattgtaaaattctaccgtgcggtcgccgaagcctctcataac
gtggctatgctacaccttgtcttaagtttagcccctgtgctgcataaaaacgtggcacag
aacctggagcttctgaaccgaagagaggaagcctccaaaatggccaacgatcataggctg
gccctgcttgccgccatcgttcgccgagatcccgaagcagctagagaagcctctaatgaa
cacttaagttacattgaggaagtcatgctgtctgttagggaagaagatagccggttgcag
cgtagtctgcgccgtttaaaaagcggtgtgtaa
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