Shewanella sediminis: Ssed_0452
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Entry
Ssed_0452 CDS
T00596
Name
(GenBank) secretion protein HlyD family protein
KO
K03543
membrane fusion protein, multidrug efflux system
Organism
sse
Shewanella sediminis
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sse02000
]
Ssed_0452
Transporters [BR:
sse02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Ssed_0452
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
CusB_dom_1
Biotin_lipoyl_2
HlyD_2
DUF555
Strep_SA_rep
BRE1
CALCOCO1
DUF3299
DUF6284
Fusion_gly
Motif
Other DBs
NCBI-ProteinID:
ABV35065
UniProt:
A8FQE2
LinkDB
All DBs
Position
565201..566259
Genome browser
AA seq
352 aa
AA seq
DB search
MSKSKLFIAVPLIFAALAGGAYYWWTQVRFFESTDNAYVEADISHISVKVPGYVVMTDIT
DNQHVNAGQLLAQLEDNQYEAKLAQSQAELDSSQAELQTLSAKVELQHALIAQAQAGVAA
AGSDRLRSEQQLRRSKKLKEKNYSSQDDVDQMQASFESSVAHLDEANAALVAKQRELAVF
NAQLLQADANVVKAKAGLELAKIQLADTQVRAPFSGVIGKRGALKGQYVQPGQALYSLVP
DGAVWITANFKETQIQHMQPGQSVQVNLDAFPDKTFTGVIDSLSPASGAKFSLLPAENAT
GNFTKIVQRIPVRIRLELGEERERLVPGLSAIVKVDTTTLSLDSALAANIGH
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagagtaaattattcattgcggtgccactgatatttgcagccttagctggtggt
gcttattactggtggacgcaagttcgtttcttcgagtcgaccgataatgcctatgttgaa
gcggatatctctcatatcagcgtcaaggttccgggctatgtggtgatgacagacatcacc
gataaccagcatgtcaacgcaggccagttgctggcacagttagaagataatcagtatgaa
gctaagttagcccagagtcaggccgagcttgatagctcacaagcagagttgcaaaccctt
tcggctaaagtagagctgcaacacgcactgatcgctcaggctcaggcgggagtcgcagcg
gctggttcggatcggttgcgatcggagcaacagttgcgccgatctaagaagctaaaagag
aagaattacagctcccaggatgacgtggatcagatgcaagcgagtttcgagtcttctgtc
gcgcatcttgatgaagctaatgcggccttggttgcaaagcaacgagagcttgcagtattt
aatgcgcaactgttacaggccgatgcgaatgtcgtgaaggctaaggcgggtttagagctt
gccaaaatccagttagcagatacacaagtcagggcgccattttctggcgtgataggtaag
cgtggggccctgaaggggcaatacgttcagccaggacaggcgctctacagtttggtaccg
gatggggctgtttggatcacggccaacttcaaagagactcagatccaacatatgcagccc
ggccagtcggttcaggtcaatctcgatgcgtttcccgacaaaacctttacaggtgttatc
gatagcctttcgccggcatccggtgccaaatttagtctgttacccgcggaaaatgcgacg
gggaattttaccaagattgttcagcgtattccggtgaggatccgcctggaactcggtgag
gagcgggagagactcgttccaggcttgagtgcgatcgttaaggtcgataccacaacattg
tcattagatagcgcacttgctgctaacatcggtcattaa
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