Shewanella sediminis: Ssed_0505
Help
Entry
Ssed_0505 CDS
T00596
Name
(GenBank) UbiD family decarboxylase
KO
K03182
4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:
4.1.1.98
]
Organism
sse
Shewanella sediminis
Pathway
sse00130
Ubiquinone and other terpenoid-quinone biosynthesis
sse01100
Metabolic pathways
sse01110
Biosynthesis of secondary metabolites
sse01240
Biosynthesis of cofactors
Module
sse_M00117
Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol
sse_M00989
Ubiquinone biosynthesis, O2-independent, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
Ssed_0505
Enzymes [BR:
sse01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.98 4-hydroxy-3-polyprenylbenzoate decarboxylase
Ssed_0505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UbiD
UbiD_C
UbiD_N
Motif
Other DBs
NCBI-ProteinID:
ABV35118
UniProt:
A8FQJ5
LinkDB
All DBs
Position
complement(619832..621313)
Genome browser
AA seq
493 aa
AA seq
DB search
MSFKDLRSFISHLEANGELKRISHPVDPHLEMTEIADRVLRAKGPALLFENPVGNEMPVL
ANLFGTPKRVAMALGKEDPLALREVGELLAFLKEPEPPRGFKDAISKIPMFKQALNMPPK
TVRNAPCQEVIKTGSDVDLTKLPIQHCWPGDVAPLVTWGLTITKGPRQKRQNLGIYRQQL
LDKDKLIMRWLDHRGGALDFKDFKEKFPGERYPVVVALGADPVTILGAVTPVPDSMSEYA
FAGLLRGERTDVCKAISCDLEVPATSEIILEGYIDPEEMAEEGPYGDHTGYYNETDKFPV
FTVTHITHRKDAIYHSTYTGRPPDEPAMLGVALNEIFVPILRKQYPEIIDFYLPPEGCSY
RMAVISIRKEYPGHAKRVMMGAWSFLRQFMYTKFIIIVDEDVNCRDWNDVIWAITTRMDP
KRDTVMIENTPIDYLDFASPVAGLGSKMGMDATNKWEGETDREWGTPIVMDEAVKQRIDT
IWDDLGIDDAPTL
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgagttttaaggatttacgcagttttataagccacctggaagcgaatggtgaacttaaa
cgtatcagccatccggtcgatccccatcttgagatgacagagatcgccgatcgtgtgttg
cgcgccaagggccctgctctgctgtttgaaaatccggttggcaacgagatgccggtattg
gcaaacttgtttggcacaccgaaacgcgtcgccatggcactgggtaaagaagatcccctc
gcactcagagaggtcggtgaactgctggcattcctgaaggagcctgagccaccacgtggc
tttaaagacgctatatccaagatccctatgttcaagcaagccttgaatatgccgccgaaa
acggttcgcaacgctccctgtcaggaagtaataaaaaccggcagtgatgtcgacctgact
aaactccctatccagcattgctggcccggcgatgtcgctcctctggtaacctggggactg
accatcactaaggggccgcgtcagaaacgacaaaacctcgggatctaccgtcaacagttg
ctcgataaagataaactgattatgcgttggctcgatcaccgtggtggcgcgctcgacttt
aaagattttaaagagaaattccccggtgaacgttacccggtagtcgtcgcgctgggtgca
gatcccgtaaccatcttaggggccgtgactccggtacccgactccatgagcgaatatgcc
ttcgcgggcctgctgcgtggtgagcgcaccgatgtatgcaaggccataagctgtgatctg
gaggttcccgccaccagcgagatcatcttagaaggttatatcgatcccgaggagatggcc
gaagagggtccctatggcgatcataccggttattacaacgagacagataaatttcctgtc
ttcacagtgacccatataacccacagaaaagacgctatctaccatagtacctacaccggc
cgtccacctgatgagccagctatgttgggcgtggcattgaatgaaatcttcgtgccgatt
ctgcgcaagcagtaccctgaaattatcgatttctatctgccaccagaaggctgctcttac
cgtatggcggtgatctcgatacgaaaagagtacccagggcacgccaagcgggtgatgatg
ggagcctggtcattcctgcgccaatttatgtataccaagtttattattatcgtcgatgaa
gacgttaattgtcgtgactggaacgatgttatctgggccatcaccacgcgtatggatccc
aagcgcgataccgtcatgatagaaaacactcctatcgattatctcgactttgcttcgcct
gttgcgggtctgggctcgaagatggggatggatgccaccaacaagtgggaaggcgaaacc
gatcgtgaatggggaaccccaatcgtgatggatgaggccgtgaaacaaagaatcgatact
atctgggacgacttgggcatagacgatgcccctaccctataa
DBGET
integrated database retrieval system
