KEGG   Shewanella sediminis: Ssed_0727
Entry
Ssed_0727         CDS       T00596                                 
Name
(GenBank) ABC transporter-related protein
  KO
K06861  lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
Organism
sse  Shewanella sediminis
Pathway
sse02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:sse00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    Ssed_0727
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:sse02000]
    Ssed_0727
Enzymes [BR:sse01000]
 7. Translocases
  7.5  Catalysing the translocation of carbohydrates and their derivatives
   7.5.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.5.2.5  ABC-type lipopolysaccharide transporter
     Ssed_0727
Transporters [BR:sse02000]
 ABC transporters, prokaryotic type
  ABC-2 type and other transporters
   Lipopolysaccharide transporter
    Ssed_0727
 Other transporters
  Pores ion channels [TC:1]
   Ssed_0727
SSDB
Motif
Pfam: ABC_tran BCA_ABC_TP_C AAA_21 DO-GTPase2 T2SSE Pectate_lyase_2 RecA AAA_23 AAA_30 Zeta_toxin AAA_22 nSTAND3
Other DBs
NCBI-ProteinID: ABV35338
UniProt: A8FR65
LinkDB
Position
complement(872085..872816)
AA seq 243 aa
MSEMTLKAVNLAKSYKSRAVVQDVSLTVKTGQIVGLLGPNGAGKTTTFYMVVGLVQSDKG
RIFIDEDDLTLDPMHLRARKGIGYLPQEASIFRKLSVRDNIMAVLQTRSEMSNNEREEQL
EHLLEEFHITHIRDSLGMALSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKK
IILQLKSRGLGVLITDHNVRETLDVCEHAYIVSHGNLIAEGTPAEILDNQQVRAVYLGEQ
FKL
NT seq 732 nt   +upstreamnt  +downstreamnt
atgagcgagatgacgctaaaggccgttaacctcgccaagagctataagagtcgtgccgta
gtacaagatgtgagtctcacagtaaaaacagggcaaattgtcggcctgttaggcccaaat
ggtgcgggaaaaaccaccacattttatatggtggtcggcttagtgcagagcgataaggga
cgcatctttatcgacgaggatgacctgaccttagatcccatgcatctacgcgccagaaaa
gggataggttatctgcctcaagaagccagtattttccgtaaactgtccgtcagagataac
atcatggcggtattacagacccgctctgagatgagtaacaatgaacgcgaagagcagctc
gaacacctgttagaagagttccatattactcatatcagagacagtctcggtatggccttg
tctggtggtgaacgtcgacgagtcgaaattgcacgagctttggcggcgaatccaaaattt
atcttgctcgatgaaccttttgccggcgtcgatccgatttccgttatcgacatcaagaaa
atcatcttacagctcaagagtcgaggccttggcgtgctaataacagaccataacgttcgt
gaaacactggacgtttgtgaacacgcctacatcgtgagtcacggaaacttaatagcagaa
ggcacccctgccgaaatcttggacaatcagcaggtacgggctgtgtacttaggtgaacaa
ttcaagctatag

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